RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SLC36A4Q6YBV0 504 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TRIM72Q6ZMU5 477 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 IRF2BP2Q7Z5L9 587 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 FAM124AQ86V42 546 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 FAM131BQ86XD5 332 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SLC41A1Q8IVJ1 513 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 OR8K1Q8NGG5 319 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 OR52K2Q8NGK3 314 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 OR2T3Q8NH03 318 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 RXFP2Q8WXD0 754 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 BAP1Q92560 729 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 NT5C3BQ969T7 300 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TTC17Q96AE7 1141 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 MYO19Q96H55 970 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 BAG1Q99933 345 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-221ENST00000477561 GPR174Q9BXC1 333 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 KCNF1Q9H3M0 494 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 PRSS16Q9NQE7 514 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ITM2CQ9NQX7 267 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ABHD10Q9NUJ1 306 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ARHGEF38Q9NXL2 777 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 DLL3Q9NYJ7 618 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 RRN3Q9NYV6 651 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ADAM22Q9P0K1 906 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SUN2Q9UH99 717 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 SLCO3A1Q9UIG8 710 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
HDAC6-221ENST00000477561 THADAQ6YHU6 1953 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 A0A1B0GVM2 712 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TCAF2A6NFQ2 919 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CCP110O43303 1012 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 SIN3BO75182 1162 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 F9P00740 461 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ASLP04424 464 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 KRT3P12035 628 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TNFAIP3P21580 790 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 MAOBP27338 520 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CD6P30203 668 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 RDXP35241 583 aaKnown RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 RPS14P62263 151 aaKnown RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 IRX4P78413 519 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CCZ1BP86790 482 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CCZ1P86791 482 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ECT2LQ008S8 904 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF33AQ06730 810 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF177Q13360 481 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC14Q49A88 953 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 ALFQ53S48 1182 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 BRMS1LQ5PSV4 323 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 RNF219Q5W0B1 726 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 CXorf57Q6NSI4 855 aaKnown RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 DGLUCYQ7Z3D6 616 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TFAP2DQ7Z6R9 452 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 DNAAF5Q86Y56 855 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TMTC1Q8IUR5 882 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 NETO1Q8TDF5 533 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 PGAP3Q96FM1 320 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-221ENST00000477561 HSPA12BQ96MM6 686 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 DNAJC7Q99615 494 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 SELENOOQ9BVL4 669 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 MAGEB5Q9BZ81 275 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TTYH3Q9C0H2 523 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 FSCN3Q9NQT6 498 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 TAS2R14Q9NYV8 317 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 MPP6Q9NZW5 540 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 MYO6Q9UM54 1294 aa8.52□□□□□ -1.05
HDAC6-221ENST00000477561 RALGAPA1Q6GYQ0 2036 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 C2CD4BA6NLJ0 364 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 C4orf47A7E2U8 309 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 E9PAM4 449 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SLC30A4O14863 429 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 CLDN11O75508 207 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ENDOD1O94919 500 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 DNTTP04053 509 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 CFIP05156 583 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 CALB1P05937 261 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SRPRAP08240 638 aaKnown RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC172P0C7W6 258 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 VAV1P15498 845 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SDC4P31431 198 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 RFC1P35251 1148 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 CDH4P55283 916 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 MTA1Q13330 715 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ASIC2Q16515 512 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 HNRNPA1L2Q32P51 320 aaKnown RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 TRIM61Q5EBN2 209 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SPDYCQ5MJ68 293 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 C9orf64Q5T6V5 341 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 STPG1Q5TH74 334 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SFMBT2Q5VUG0 894 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 E4F1Q66K89 784 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ACAD10Q6JQN1 1059 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms