RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ARHGAP42A6NI28 874 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ANKRD65E5RJM6 399 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 APOEP02649 317 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 HMGA1P17096 107 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 SYN1P17600 705 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 PHBP35232 272 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 MAGEA3P43357 314 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 PAPOLAP51003 745 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 GEMIN4P57678 1058 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 BMPR2Q13873 1038 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TRIP4Q15650 581 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 PPP1R21Q6ZMI0 780 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TRABD2AQ86V40 505 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 CHSY1Q86X52 802 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ZNF683Q8IZ20 524 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ZNF461Q8TAF7 563 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ZSCAN18Q8TBC5 510 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 DCAKDQ8WVC6 231 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 BADQ92934 168 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SPATA17Q96L03 361 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 KLHL5Q96PQ7 755 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ATXN3LQ9H3M9 355 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TRABDQ9H4I3 376 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 INTS9Q9NV88 658 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 CLIC5Q9NZA1 410 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 J3KR12 359 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 NRG2O14511 850 aaPredicted RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 NDUFAB1O14561 156 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 PRRG1O14668 218 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 NDC80O14777 642 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 KIAA0355O15063 1070 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TEX28O15482 410 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 MAFKO60675 156 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 GJB3O75712 270 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 C1QAP02745 245 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 URODP06132 367 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ZDHHC11BP0C7U3 371 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CSH1P0DML2 217 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CSH2P0DML3 217 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 MX2P20592 715 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 SLC6A4P31645 630 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 MSH2P43246 934 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 HNRNPH2P55795 449 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 C1QTNF8P60827 252 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 MAXP61244 160 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 DSG1Q02413 1049 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TWF1Q12792 350 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 PARP6Q2NL67 630 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TEX44Q53QW1 395 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 NLRP14Q86W24 1093 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ARHGAP18Q8N392 663 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 RTL3Q8N8U3 475 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 MCUQ8NE86 351 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 DPF3Q92784 378 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 HMCESQ96FZ2 354 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 RPRD1AQ96P16 312 aaPredicted RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 SLC22A12Q96S37 553 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CYP2S1Q96SQ9 504 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 PAIP2Q9BPZ3 127 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 RNF38Q9H0F5 515 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 SPG21Q9NZD8 308 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 PSMC3IPQ9P2W1 217 aaPredicted RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 AFF4Q9UHB7 1163 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 BACE2Q9Y5Z0 518 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 XIRP2A4UGR9 3374 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 ZNF840PA6NDX5 716 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 SMAPO00193 183 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 COCHO43405 550 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ATP9BO43861 1147 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ABLIM3O94929 683 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 HLA-DQB2P05538 268 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CCNB1P14635 433 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 HOXC13P31276 330 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ACVRL1P37023 503 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 FDFT1P37268 417 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 SGSHP51688 502 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TAF12Q16514 161 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CERCAMQ5T4B2 595 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TAOK1Q7L7X3 1001 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CROCCP2Q86T23 111 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TADA2BQ86TJ2 420 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 DENND1CQ8IV53 801 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TMEM199Q8N511 208 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ARNTL2Q8WYA1 636 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 STAMBPL1Q96FJ0 436 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TEKT5Q96M29 485 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CCT8L2Q96SF2 557 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CYTH2Q99418 400 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 EBNA1BP2Q99848 306 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 UBE2OQ9C0C9 1292 aaKnown RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 STMN4Q9H169 189 aaPredicted RBP6.37□□□□□ -1.39
CLK1-210ENST00000473565 EPN3Q9H201 632 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 CATSPERBQ9H7T0 1116 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 TRPC7Q9HCX4 862 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 IGSF9Q9P2J2 1179 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ALPK3Q96L96 1907 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 ANAPC1Q9H1A4 1944 aa6.37□□□□□ -1.39
CLK1-210ENST00000473565 GOLGA8TH3BQL2 631 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms