RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NRLP54845 237 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CCZ1BP86790 482 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CCZ1P86791 482 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ECT2LQ008S8 904 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SLC25A11Q02978 314 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 LMAN2Q12907 356 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 POLD3Q15054 466 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GEN1Q17RS7 908 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GAB4Q2WGN9 574 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PLEKHG6Q3KR16 790 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PARP15Q460N3 678 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 FNDC3BQ53EP0 1204 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 KCNT1Q5JUK3 1230 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 IER5LQ5T953 404 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 MBLAC2Q68D91 279 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TMCO3Q6UWJ1 677 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RFX8Q6ZV50 586 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 BZW1Q7L1Q6 419 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PEX26Q7Z412 305 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 C14orf80Q86SX3 495 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CIR1Q86X95 450 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 VSIG1Q86XK7 387 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC50Q8IVM0 306 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 BBS5Q8N3I7 341 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RTL3Q8N8U3 475 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 DCAF4L2Q8NA75 395 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RPLP0P6Q8NHW5 317 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TPCN2Q8NHX9 752 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 NSMCE1Q8WV22 266 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TRIM44Q96DX7 344 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RBM41Q96IZ5 413 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PDLIM2Q96JY6 352 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 FERMT1Q9BQL6 677 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF670Q9BS34 389 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SPON2Q9BUD6 331 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 FBRSQ9HAH7 460 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PRDM16Q9HAZ2 1276 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ATP13A1Q9HD20 1204 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TMPRSS4Q9NRS4 437 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TMEM248Q9NWD8 314 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GPATCH2LQ9NWQ4 482 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ELOVL2Q9NXB9 296 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 MPP6Q9NZW5 540 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SUN2Q9UH99 717 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 MMP17Q9ULZ9 603 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GUCA1BQ9UMX6 200 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 TBC1D30Q9Y2I9 924 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 STARD13Q9Y3M8 1113 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 HCN4Q9Y3Q4 1203 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ALG6Q9Y672 507 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CUL9Q8IWT3 2517 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 FANCMQ8IYD8 2048 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 THADAQ6YHU6 1953 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF318Q5VUA4 2279 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CXorf51AA0A1B0GTR3 108 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 WASH4PA8MWX3 477 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CHURC1-FNTBB4DL54 471 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 K7EQS6 105 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CBX4O00257 560 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RNASEH1O60930 286 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CNTN5O94779 1100 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 KLF8O95600 359 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 EPHX1P07099 455 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CISD3P0C7P0 127 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 HNRNPLP14866 589 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 GOT1P17174 413 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ERCC2P18074 760 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 HOXC13P31276 330 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CD70P32970 193 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CSKP41240 450 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 DGKEP52429 567 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 NDST2P52849 883 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PLK1P53350 603 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 GNA12Q03113 381 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 SLC20A2Q08357 652 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 SEMA3BQ13214 749 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 BYSLQ13895 437 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 TFDP2Q14188 446 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ACCSLQ4AC99 568 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RAB6CQ53S08 254 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ALFQ53S48 1182 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC181Q5TID7 509 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 MANEALQ5VSG8 457 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 DAB2IPQ5VWQ8 1189 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RNF43Q68DV7 783 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ZC3H14Q6PJT7 736 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF662Q6ZS27 426 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 SYT13Q7L8C5 426 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 DSG4Q86SJ6 1040 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 LRRC49Q8IUZ0 686 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 C1orf210Q8IVY1 113 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF683Q8IZ20 524 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RCOR2Q8IZ40 523 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PYROXD2Q8N2H3 581 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms