RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 NUP205Q92621 2012 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 GOLGA8TH3BQL2 631 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 DENRO43583 198 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 P4HA1P13674 534 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ATICP31939 592 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 GP5P40197 560 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 FLOT2Q14254 428 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 EML3Q32P44 896 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 C4orf22Q6V702 233 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 STRA8Q7Z7C7 330 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 TMEM110Q86TL2 294 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ZFP28Q8NHY6 868 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF669Q96BR6 464 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM167AQ96KS9 214 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 PKP2Q99959 881 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 C11orf84Q9BUA3 381 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 STK39Q9UEW8 545 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CCDC78A2IDD5 438 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 TK2O00142 265 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ATP9BO43861 1147 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 PGK2P07205 417 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ENO3P13929 434 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 CCDC130P13994 396 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 PCSK6P29122 969 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ADORA2BP29275 332 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CEACAM7Q14002 265 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ADGRE1Q14246 886 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 INSCQ1MX18 579 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF423Q2M1K9 1284 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 Q3C1V9 767 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 LSM12Q3MHD2 195 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 FSCBQ5H9T9 825 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 OLFML2BQ68BL8 750 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 SPNS2Q8IVW8 549 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 MICALL2Q8IY33 904 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF567Q8N184 647 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CCNYQ8ND76 341 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 PIP4K2CQ8TBX8 421 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 DGCR14Q96DF8 476 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 KLHL32Q96NJ5 620 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CATSPER2Q96P56 530 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 RBBP8Q99708 897 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 GATA5Q9BWX5 397 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 NUF2Q9BZD4 464 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 RBM38Q9H0Z9 239 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 LMCD1Q9NZU5 365 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CDY2AQ9Y6F7 541 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CDY1Q9Y6F8 540 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 A0A096LPK6 155 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 KCNK1O00180 336 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 SRGAP2BP0DMP2 458 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 MLNP12872 115 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 ARF4P18085 180 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 EDNRBP24530 442 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 RPL5P46777 297 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 NR2C2P49116 596 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PDK1Q15118 436 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PTAR1Q7Z6K3 402 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 LRGUKQ96M69 825 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 EPB41L1Q9H4G0 881 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM96AQ9H5X1 160 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 GNEQ9Y223 722 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 VTNP04004 478 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 ARSAP15289 507 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PRDX6P30041 224 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 RGS2P41220 211 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PIGGQ5H8A4 983 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM219BQ5XKK7 198 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 MFSD3Q96ES6 412 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 HOXC10Q9NYD6 342 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PTTG2Q9NZH5 202 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 C6orf203Q9P0P8 240 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
PDZRN3-203ENST00000462146 PLXNA1Q9UIW2 1896 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 IRF6O14896 467 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 POLBP06746 335 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 NELFEP18615 380 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 SAT1P21673 171 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 MAGEA12P43365 314 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 GLRBP48167 497 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 MAP7Q14244 749 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 CCDC153Q494R4 210 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 HSP90AA5PQ58FG0 334 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 TICAM1Q8IUC6 712 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 CHST13Q8NET6 341 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 KBTBD7Q8WVZ9 684 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 KIF12Q96FN5 646 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 CPNE1Q99829 537 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 APOL2Q9BQE5 337 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 UNKQ9C0B0 810 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 SENP6Q9GZR1 1112 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF112Q9UJU3 913 aa11.98□□□□□ -0.49
PDZRN3-203ENST00000462146 TRPA1O75762 1119 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms