RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF623O75123 536 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ENTPD3O75355 529 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPAN9O75954 239 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SEC14L2O76054 403 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SEC31AO94979 1220 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PDE8BO95263 885 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CCNDBP1O95273 360 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 EIF2S1P05198 315 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ATF7P17544 494 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FPR3P25089 353 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTPN9P43378 593 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RPS6KA3P51812 740 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PPP5CP53041 499 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CCDC15Q0P6D6 951 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 IL13RA2Q14627 380 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ICAM4Q14773 271 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RASA2Q15283 850 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RNASE12Q5GAN4 147 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CDC73Q6P1J9 531 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 C17orf53Q8N3J3 647 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SIRT6Q8N6T7 355 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ENDOVQ8N8Q3 282 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM116Q8NCL8 245 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TOR1AIP2Q8NFQ8 470 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SCFD2Q8WU76 684 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 EDAQ92838 391 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 INTS12Q96CB8 462 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SAAL1Q96ER3 474 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FEM1CQ96JP0 617 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 GPR78Q96P69 363 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TTC12Q9H892 705 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CD248Q9HCU0 757 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 MPP6Q9NZW5 540 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 LIMA1Q9UHB6 759 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 AMFRQ9UKV5 643 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 INTS6Q9UL03 887 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SUFUQ9UMX1 484 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM5Q9Y2B1 443 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PKP3Q9Y446 797 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TEX13CA0A0J9YWL9 993 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PABPN1LA6NDY0 278 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 DSCR3O14972 297 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CYP27B1O15528 508 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TACC1O75410 805 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ONECUT2O95948 504 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TUBBP07437 444 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CHRM2P08172 466 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CHRM4P08173 479 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 C1SP09871 688 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALDOCP09972 364 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 RFPL3SP0C7P2 107 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CYP4B1P13584 511 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 SELLP14151 372 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PKMP14618 531 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 MATN1P21941 496 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GJC1P36383 396 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CPOXP36551 454 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NNMTP40261 264 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 RAP1GAPP47736 663 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF84P51523 738 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PDE1AP54750 535 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 SNX16P57768 344 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TXNL4AP83876 142 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NEXNQ0ZGT2 675 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTPRRQ15256 657 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NAA16Q6N069 864 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM81Q6P7N7 255 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CLEC17AQ6ZS10 378 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PARS2Q7L3T8 475 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 MDGA2Q7Z553 956 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GALNT7Q86SF2 657 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KCTD6Q8NC69 237 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ASB10Q8WXI3 467 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 AKAP1Q92667 903 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ARHGEF2Q92974 986 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL29Q96CT2 875 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM89AQ96GI7 184 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PGBD1Q96JS3 809 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GATA5Q9BWX5 397 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NPLQ9BXD5 320 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TRIM31Q9BZY9 425 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NDST4Q9H3R1 872 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 DUSP22Q9NRW4 184 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 EHD3Q9NZN3 535 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms