RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 CCDC105Q8IYK2 499 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 DDX51Q8N8A6 666 aaKnown RBP eCLIP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 CATSPERBQ9H7T0 1116 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 AMFRQ9UKV5 643 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 MFHAS1Q9Y4C4 1052 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 MYO18AQ92614 2054 aaKnown RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 PI15O43692 258 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 HCAR3P49019 387 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 PREPLQ4J6C6 727 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 RNF219Q5W0B1 726 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 ZNF557Q8N988 423 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 PBXIP1Q96AQ6 731 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 RNF25Q96BH1 459 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 NELL2Q99435 816 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 ETNK2Q9NVF9 386 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 SIT1Q9Y3P8 196 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 CUL9Q8IWT3 2517 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 CHD5Q8TDI0 1954 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 A0A0D9SEW6 157 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 C3orf70A6NLC5 250 aaPredicted RBP31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 FGF10O15520 208 aaPredicted RBP31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 DCNP07585 359 aaKnown RBP31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 CTNNA1P35221 906 aaKnown RBP31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 PDK2Q15119 407 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 NETO2Q8NC67 525 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 SORCS1Q8WY21 1168 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 C11orf16Q9NQ32 467 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 DDX56Q9NY93 547 aaKnown RBP31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 HCN2Q9UL51 889 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 PCDHA3Q9Y5H8 950 aa31.41■■■□□ 2.62
CSNK1E-206ENST00000413574 ZNF135P52742 658 aaPredicted RBP31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 C6orf118Q5T5N4 469 aa31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 SETD3Q86TU7 594 aaPredicted RBP31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 AHI1Q8N157 1196 aa31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 FEM1AQ9BSK4 669 aa31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 CIPCQ9C0C6 399 aa31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 MUC3BQ9H195 1237 aa31.4■■■□□ 2.62
CSNK1E-206ENST00000413574 WASH4PA8MWX3 477 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 RNF40O75150 1001 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 MAPKAPK2P49137 400 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 PLEKHG6Q3KR16 790 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 PITRM1Q5JRX3 1037 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 Q6ZS52 159 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 MAP7D3Q8IWC1 876 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 OR7D4Q8NG98 312 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 ALG14Q96F25 216 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 NOL6Q9H6R4 1146 aaKnown RBP31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 OR51B4Q9Y5P0 310 aa31.39■■■□□ 2.62
CSNK1E-206ENST00000413574 CTNNA2P26232 953 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 TNFRSF4P43489 277 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 DNA2P51530 1060 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 LLGL1Q15334 1064 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 C2orf27AQ580R0 203 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ANKRD20A8PQ5CZ79 823 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 MBLAC2Q68D91 279 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 MFSD7Q6UXD7 560 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 KATNAL2Q8IYT4 538 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 PCDH19Q8TAB3 1148 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ZNF670Q9BS34 389 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ELOVL2Q9NXB9 296 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 RCOR3Q9P2K3 495 aaPredicted RBP31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 PEX5P50542 639 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ODF2Q5BJF6 829 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 NUDT18Q6ZVK8 323 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 NPWQ8N729 165 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 WFIKKN2Q8TEU8 576 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 CYB5D2Q8WUJ1 264 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ALG3Q92685 438 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ALS2CR12Q96Q35 445 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 OSBPL6Q9BZF3 934 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 RETREG1Q9H6L5 497 aa31.38■■■□□ 2.61
CSNK1E-206ENST00000413574 ILVBLA1L0T0 632 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 DCLK1O15075 740 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 TIE1P35590 1138 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 ACVRL1P37023 503 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 CTSOP43234 321 aaPredicted RBP31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 KIR2DL1P43626 348 aaPredicted RBP31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 GNA12Q03113 381 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 DGKKQ5KSL6 1271 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 EGFLAMQ63HQ2 1017 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 C17orf53Q8N3J3 647 aaPredicted RBP31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 CELF6Q96J87 481 aaKnown RBP31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 KLC2Q9H0B6 622 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 VPS28Q9UK41 221 aa31.37■■■□□ 2.61
CSNK1E-206ENST00000413574 CCDC66A2RUB6 948 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 CHRM1P11229 460 aaPredicted RBP31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 POLR2EP19388 210 aaKnown RBP31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 SLC12A1Q13621 1099 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 LRRC32Q14392 662 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 PKN3Q6P5Z2 889 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 CLDN23Q96B33 292 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 FAF2Q96CS3 445 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 SPON2Q9BUD6 331 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 STARD13Q9Y3M8 1113 aa31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 NYNRINQ9P2P1 1898 aaKnown RBP31.36■■■□□ 2.61
CSNK1E-206ENST00000413574 DDX3YO15523 660 aaKnown RBP31.35■■■□□ 2.61
CSNK1E-206ENST00000413574 RAMP2O60895 175 aa31.35■■■□□ 2.61
CSNK1E-206ENST00000413574 ZRANB2O95218 330 aaKnown RBP eCLIP31.35■■■□□ 2.61
CSNK1E-206ENST00000413574 AOC1P19801 751 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms