RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 VEGFBP49765 207 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 PDCD2Q16342 344 aaPredicted RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 SUSD6Q92537 303 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 CSPG4P5Q96PW8 444 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 C11orf49Q9H6J7 331 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 YJEFN3A6XGL0 299 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 E7ENQ6 273 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CCL16O15467 120 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CLTBP09497 229 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 PGAM1P18669 254 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 KBTBD12Q3ZCT8 623 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SCAMP5Q8TAC9 235 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CASQ2O14958 399 aaPredicted RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 BANF1O75531 89 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 GPR158Q5T848 1215 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 NAT16Q8N8M0 369 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 AENQ8WTP8 325 aaKnown RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CLEC4CQ8WTT0 213 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 Q9H521 79 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CRYL1Q9Y2S2 319 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CNMDO75829 334 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 MYBL2P10244 700 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ACADMP11310 421 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SERPINA4P29622 427 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 RFWD2Q8NHY2 731 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 FNIP1Q8TF40 1166 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 P2RY11Q96G91 374 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 PTPN18Q99952 460 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ILKAPQ9H0C8 392 aaPredicted RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 TMEM51Q9NW97 253 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CFAP97Q9P2B7 532 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ANGPT2O15123 496 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 APOA4P06727 396 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ITGAVP06756 1048 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 ENO3P13929 434 aaPredicted RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 RFWD3Q6PCD5 774 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 IFNEQ86WN2 208 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 CRYGNQ8WXF5 182 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SMG7Q92540 1137 aaKnown RBP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPRN2-202ENST00000389416 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 LCA5LO95447 670 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CFHP08603 1231 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 RPSAP08865 295 aaKnown RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 GPD2P43304 727 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 ERAP2Q6P179 960 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CTU1Q7Z7A3 348 aaKnown RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 PYROXD2Q8N2H3 581 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 HCRTO43612 131 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CD48P09326 243 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CDC25CP30307 473 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 SOX11P35716 441 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 ATXN1P54253 815 aaKnown RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 NEPROQ6NW34 567 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 KDM7AQ6ZMT4 941 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 TAS1R3Q7RTX0 852 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 HJURPQ8NCD3 748 aaPredicted RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 SLC7A5P2Q9GIP4 190 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CPA3P15088 417 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 DAOAP59103 153 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CDK16Q00536 496 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 FBXL19Q6PCT2 694 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 BTN2A3PQ96KV6 586 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 NFKBIZQ9BYH8 718 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 PRDM16Q9HAZ2 1276 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 RGS18Q9NS28 235 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 FAM107AO95990 144 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 ZNF865P0CJ78 1059 aaPredicted RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 TYMPP19971 482 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 SERPINA13PQ6UXR4 307 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 NLRP9Q7RTR0 991 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 TTC7BQ86TV6 843 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 LCA5Q86VQ0 697 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 OR6K2Q8NGY2 324 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 VCX3AQ9NNX9 186 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms