RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 NIPAL4Q0D2K0 466 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 MRPL58Q14197 206 aaKnown RBP18.3■□□□□ 0.52
CTSA-204ENST00000372484 MANEALQ5VSG8 457 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 RNF43Q68DV7 783 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 CDHR3Q6ZTQ4 885 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 MARK2Q7KZI7 788 aaKnown RBP18.3■□□□□ 0.52
CTSA-204ENST00000372484 ATPAF2Q8N5M1 289 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 GPR152Q8TDT2 470 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 SH3TC2Q8TF17 1288 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 SEPT8Q92599 483 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 DPF3Q92784 378 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 MLPHQ9BV36 600 aaPredicted RBP18.3■□□□□ 0.52
CTSA-204ENST00000372484 SLC13A1Q9BZW2 595 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 BFARQ9NZS9 450 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 VANGL2Q9ULK5 521 aa18.3■□□□□ 0.52
CTSA-204ENST00000372484 OR6C75A6NL08 312 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 KCNU1A8MYU2 1149 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 NEFHP12036 1026 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CCNCP24863 283 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 TUBP50607 506 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CES3Q6UWW8 571 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 ARHGAP36Q6ZRI8 547 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 OTOAQ7RTW8 1153 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 ARHGAP18Q8N392 663 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 LZTR1Q8N653 840 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 GBP7Q8N8V2 638 aaPredicted RBP18.29■□□□□ 0.52
CTSA-204ENST00000372484 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
CTSA-204ENST00000372484 SEZ6LQ9BYH1 1024 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CASS4Q9NQ75 786 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 GMIPQ9P107 970 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 SLC17A6Q9P2U8 582 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 SLC12A4Q9UP95 1085 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 TLR6Q9Y2C9 796 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 HS3ST4Q9Y661 456 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 UBOX5O94941 541 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 GSTA1P08263 222 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CPB1P15086 417 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CCNFP41002 786 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 PRMT2P55345 433 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 MGAT5Q09328 741 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 PRPSAP1Q14558 356 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 CHSY1Q86X52 802 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 ARHGAP12Q8IWW6 846 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 USP33Q8TEY7 942 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 TSGA13Q96PP4 275 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 LRRC40Q9H9A6 602 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 RXFP1Q9HBX9 757 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 PCMTD2Q9NV79 361 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 HAUS2Q9NVX0 235 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 UBP1Q9NZI7 540 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 HCSTQ9UBK5 93 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 PLLPQ9Y342 182 aa18.29■□□□□ 0.52
CTSA-204ENST00000372484 MRPL42Q9Y6G3 142 aaKnown RBP18.29■□□□□ 0.52
CTSA-204ENST00000372484 E9PAM4 449 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MYCP01106 439 aaPredicted RBP18.28■□□□□ 0.52
CTSA-204ENST00000372484 CCNB1P14635 433 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SLC11A1P49279 550 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 APLP1P51693 650 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SPANXN3Q5MJ09 141 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.28■□□□□ 0.52
CTSA-204ENST00000372484 FITM2Q8N6M3 262 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 PTPRN2Q92932 1015 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MARCH5Q9NX47 278 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 IL1RAPL1Q9NZN1 696 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 ZFATQ9P243 1243 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 HGSO14964 777 aaPredicted RBP18.28■□□□□ 0.52
CTSA-204ENST00000372484 SOAT2O75908 522 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 ERVK-10P10266 1014 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SLC2A3P11169 496 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 FGFR3P22607 806 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SERPINB4P48594 390 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 VEGFBP49765 207 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MLLT6P55198 1093 aaPredicted RBP18.28■□□□□ 0.52
CTSA-204ENST00000372484 NAB1Q13506 487 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SMAD1Q15797 465 aaKnown RBP18.28■□□□□ 0.52
CTSA-204ENST00000372484 FYB2Q5VWT5 728 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MSANTD2Q6P1R3 559 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 PACS1Q6VY07 963 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 RASSF3Q86WH2 238 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 CNTD1Q8N815 330 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 CERS2Q96G23 380 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 APOL2Q9BQE5 337 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SLC39A8Q9C0K1 460 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 NDFIP2Q9NV92 336 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MKS1Q9NXB0 559 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 MPP6Q9NZW5 540 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 SLC27A5Q9Y2P5 690 aa18.28■□□□□ 0.52
CTSA-204ENST00000372484 NT5C1B-RDH14C9J2C7 533 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 PQBP1O60828 265 aaKnown RBP18.27■□□□□ 0.52
CTSA-204ENST00000372484 YWHAQP27348 245 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 TBX4P57082 545 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 ARTNQ5T4W7 220 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 FBXW10Q5XX13 1052 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 FUT10Q6P4F1 479 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 TIFABQ6ZNK6 161 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 OTOP3Q7RTS5 596 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 C14orf80Q86SX3 495 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 FBXO32Q969P5 355 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms