RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 ZSWIM1Q9BR11 485 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 TXLNGYQ9BZA5 131 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 LINC00597Q9H2U6 94 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CENPHQ9H3R5 247 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC134Q9H6E4 229 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 LRRC19Q9H756 370 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 LRRC4Q9HBW1 653 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 TSPAN16Q9UKR8 245 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 NOVA2Q9UNW9 492 aaKnown RBP10.74□□□□□ -0.69
COL5A1-202ENST00000371820 USP3Q9Y6I4 520 aa10.74□□□□□ -0.69
COL5A1-202ENST00000371820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.73□□□□□ -0.69
COL5A1-202ENST00000371820 A0A1W2PQH9 124 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 FOXD2O60548 495 aaPredicted RBP10.73□□□□□ -0.69
COL5A1-202ENST00000371820 GSTA1P08263 222 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 ADRB1P08588 477 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 IRF1P10914 325 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 OPRD1P41143 372 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 MRPS21P82921 87 aaKnown RBP10.73□□□□□ -0.69
COL5A1-202ENST00000371820 COG7P83436 770 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CDR2Q01850 454 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 GCNT1Q02742 428 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CENPCQ03188 943 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 ITIH4Q14624 930 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 C10orf120Q5SQS8 335 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 C6orf89Q6UWU4 347 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 HTR3DQ70Z44 454 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CEP68Q76N32 757 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 SYT13Q7L8C5 426 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 RPLP0P6Q8NHW5 317 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 GAB3Q8WWW8 586 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 SHC3Q92529 594 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 SERPINB12Q96P63 405 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 DCLK3Q9C098 648 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 THAP2Q9H0W7 228 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 PPCSQ9HAB8 311 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 MRPL47Q9HD33 250 aaKnown RBP10.73□□□□□ -0.69
COL5A1-202ENST00000371820 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
COL5A1-202ENST00000371820 SLC12A6Q9UHW9 1150 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 STRIP2Q9ULQ0 834 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF510Q9Y2H8 683 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 PCDHB4Q9Y5E5 795 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
COL5A1-202ENST00000371820 KIAA1549LQ6ZVL6 1849 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 RALGAPA1Q6GYQ0 2036 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 SPAG17Q6Q759 2223 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 MYO1FO00160 1098 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 HOXC11O43248 304 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 SPOPO43791 374 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 GDF9O60383 454 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 GAS8O95995 478 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ABCB4P21439 1286 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 COILP38432 576 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 PEX5P50542 639 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 TKTL1P51854 596 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ACTN3Q08043 901 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 PDE4CQ08493 712 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 UAP1Q16222 522 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 RAB41Q5JT25 222 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ERMARDQ5T6L9 678 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 RNF187Q5TA31 235 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC137Q6PK04 289 aaKnown RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC91Q7Z6B0 441 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 TTC30AQ86WT1 665 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 SLC13A5Q86YT5 568 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 BBS7Q8IWZ6 715 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 SIX6OS1Q8N1H7 587 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 UBR7Q8N806 425 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 GBP7Q8N8V2 638 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 MAGEC3Q8TD91 643 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 GRAMD1AQ96CP6 724 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 CHMP6Q96FZ7 201 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 LOXL4Q96JB6 756 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 XPO6Q96QU8 1125 aaKnown RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 FBRSL1Q9HCM7 1045 aaKnown RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 PPANQ9NQ55 473 aaKnown RBP10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ARHGEF4Q9NR80 690 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 SPHK2Q9NRA0 654 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ZDHHC18Q9NUE0 388 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 WDR35Q9P2L0 1181 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 DEC1Q9P2X7 70 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ATP8A1Q9Y2Q0 1164 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 EML5Q05BV3 1969 aa10.72□□□□□ -0.69
COL5A1-202ENST00000371820 ZSCAN5CA6NGD5 496 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 O00370 1275 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 SCAMP3O14828 347 aaKnown RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CHUKO15111 745 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 MED7O43513 233 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 TCEA3O75764 348 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms