RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 SYNE3Q6ZMZ3 975 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 BBS12Q6ZW61 710 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 PEG10Q86TG7 708 aaKnown RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 KRTAP1-3Q8IUG1 177 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 DNAJC10Q8IXB1 793 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 PNPLA1Q8N8W4 532 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 PPHLN1Q8NEY8 458 aaKnown RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 SH3RF3Q8TEJ3 882 aaPredicted RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 HTRA1Q92743 480 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 LENG8Q96PV6 779 aaPredicted RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 DUSP22Q9NRW4 184 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 SERTAD4Q9NUC0 356 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 PI4KBQ9UBF8 816 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 DNAJC16Q9Y2G8 782 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 KAT6BQ8WYB5 2073 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 UBR3Q6ZT12 1888 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 A6NLC8 198 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 NKX2-8O15522 239 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 RHOBTB3O94955 611 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 TMIGD3P0DMS9 266 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 HKR1P10072 659 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 CYP19A1P11511 503 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 IGHMBP2P38935 993 aaKnown RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 GEMIN4P57678 1058 aaKnown RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 RPL15P61313 204 aaKnown RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 CBFBQ13951 182 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 ANKRD1Q15327 319 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 FAM187BQ17R55 369 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 PLEKHO1Q53GL0 409 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 L1TD1Q5T7N2 865 aaKnown RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 ACSM6Q6P461 480 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 RASGRP2Q7LDG7 609 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 MAATS1Q7Z4T9 603 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 WDR53Q7Z5U6 358 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 SKA1Q96BD8 255 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 KTI12Q96EK9 354 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC26A6Q9BXS9 759 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 SNX15Q9NRS6 342 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 SYBUQ9NX95 663 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 BAG5Q9UL15 447 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 TMEM98Q9Y2Y6 226 aa6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 SOS1Q07889 1333 aaPredicted RBP6.24□□□□□ -1.41
RNU4-39P-201ENST00000362455 ARID1BQ8NFD5 2236 aaPredicted RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 TAF1LQ8IZX4 1826 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 CARMIL3Q8ND23 1372 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 PKD1L3Q7Z443 1732 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 GLTPD2A6NH11 291 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 AGAP5A6NIR3 686 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 MBD3L5A6NJ08 208 aaPredicted RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 LINC00473A8K010 186 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 H0YIZ8 118 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 SUV39H1O43463 412 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 PRAMEF2O60811 474 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 TTLL1O95922 423 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 EBLN1P0CF75 366 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 HSPA1AP0DMV8 641 aaKnown RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 HSPA1BP0DMV9 641 aaKnown RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 NDUFB7P17568 137 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 FPR3P25089 353 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 GRIA3P42263 894 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 VAMP2P63027 116 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 MRPS35P82673 323 aaKnown RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 MPP1Q00013 466 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 LMAN2Q12907 356 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 MAPK7Q13164 816 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC39A6Q13433 755 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 DCTN1Q14203 1278 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D25Q3MII6 688 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 CTXN3Q4LDR2 81 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 LRRC24Q50LG9 513 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 ZNF484Q5JVG2 852 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 DENND2CQ68D51 928 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 SPRED1Q7Z699 444 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 C16orf71Q8IYS4 520 aaPredicted RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 ABHD11Q8NFV4 315 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC2A12Q8TD20 617 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 REEP2Q9BRK0 252 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 CINPQ9BW66 212 aaPredicted RBP6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 FSD1LQ9BXM9 530 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 ZHX3Q9H4I2 956 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 RMI1Q9H9A7 625 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 PLEKHA2Q9HB19 425 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 VPS4AQ9UN37 437 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC12A4Q9UP95 1085 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 RCE1Q9Y256 329 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 PCDHA10Q9Y5I2 948 aa6.23□□□□□ -1.41
RNU4-39P-201ENST00000362455 PLEKHG2Q9H7P9 1386 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3DA0A087WVF3 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3IA0A087WXS9 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3EA0A087X179 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3KA0A087X1G2 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3BA6NDS4 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3FA6NER0 549 aaPredicted RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 HMGB1P1B2RPK0 211 aaPredicted RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3LB9A6J9 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 QSOX1O00391 747 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms