RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 RWDD4Q6NW29 188 aaKnown RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 RIN3Q8TB24 985 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 AZIN2Q96A70 460 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 TBC1D31Q96DN5 1066 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 P2RY11Q96G91 374 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC114Q96M63 670 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 C2orf16Q68DN1 1984 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 TRIOBPQ9H2D6 2365 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 WASH4PA8MWX3 477 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 MCF2LO15068 1137 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 LINC01565O15544 149 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 XYLBO75191 536 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 TACR2P21452 398 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 HTR7P34969 479 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 RPL21P46778 160 aaKnown RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 PTK6Q13882 451 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 TCEAL5Q5H9L2 206 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 WLSQ5T9L3 541 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 TMC5Q6UXY8 1006 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 Q6ZNB5 142 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 PDZD4Q76G19 769 aaPredicted RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 ARHGAP12Q8IWW6 846 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 ZSWIM3Q96MP5 696 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 LGMNQ99538 433 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 TRIM31Q9BZY9 425 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 SMG9Q9H0W8 520 aaKnown RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 NEUROG2Q9H2A3 272 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 DPH5Q9H2P9 285 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 IGFLR1Q9H665 355 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 NOL6Q9H6R4 1146 aaKnown RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 PPARGC1AQ9UBK2 798 aaKnown RBP15.09■□□□□ 0.01
CXCL12-201ENST00000343575 DPP7Q9UHL4 492 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 CDH22Q9UJ99 828 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 STOML2Q9UJZ1 356 aa15.09■□□□□ 0.01
CXCL12-201ENST00000343575 BCLAF3A2AJT9 711 aaKnown RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 GMNCA6NCL1 334 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 GFRA2O00451 464 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 RBL1P28749 1068 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 HARS2P49590 506 aaKnown RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 SGSHP51688 502 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 DRG2P55039 364 aaKnown RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 XRCC4Q13426 336 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 SPDYCQ5MJ68 293 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 GPR158Q5T848 1215 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 AFMIDQ63HM1 303 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 TTC19Q6DKK2 380 aaPredicted RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 TMEM184AQ6ZMB5 413 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC13Q8IYE1 715 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 SH2D3CQ8N5H7 860 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 FAM71DQ8N9W8 422 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 CDCA3Q99618 268 aaPredicted RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 TTYH1Q9H313 450 aaPredicted RBP15.08■□□□□ 0.01
CXCL12-201ENST00000343575 PRDM12Q9H4Q4 367 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 CCL26Q9Y258 94 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 SNX24Q9Y343 169 aa15.08■□□□□ 0.01
CXCL12-201ENST00000343575 TRAV19A0A0A6YYK7 116 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 H7C0C1 242 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 FGF10O15520 208 aaPredicted RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 VAV1P15498 845 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 SLC8A1P32418 973 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 ATP5OP48047 213 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 GUCY1A3Q02108 690 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 LRIT3Q3SXY7 679 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 LACTB2Q53H82 288 aaPredicted RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 KCTD16Q68DU8 428 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 DARS2Q6PI48 645 aaKnown RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 CHSY1Q86X52 802 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 CIR1Q86X95 450 aaPredicted RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 CMTM8Q8IZV2 173 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 RTL3Q8N8U3 475 aaKnown RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 ITFG1Q8TB96 612 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 GRK7Q8WTQ7 553 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 IFT81Q8WYA0 676 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 SMG7Q92540 1137 aaKnown RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 CELF6Q96J87 481 aaKnown RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 PRICKLE1Q96MT3 831 aaPredicted RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 QKIQ96PU8 341 aaKnown RBP eCLIP15.08■□□□□ 0
CXCL12-201ENST00000343575 ZYG11BQ9C0D3 744 aa15.08■□□□□ 0
CXCL12-201ENST00000343575 UTP11Q9Y3A2 253 aaKnown RBP15.08■□□□□ 0
CXCL12-201ENST00000343575 C5orf60A6NFR6 353 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 E7EVH7 732 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 SGK1O00141 431 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 TRDMT1O14717 391 aaKnown RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 FGF19O95750 216 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 GAS8O95995 478 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 CKMP06732 381 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 PFKLP17858 780 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 LMNB2Q03252 620 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 MTA1Q13330 715 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 PRKD1Q15139 912 aaPredicted RBP15.07■□□□□ 0
CXCL12-201ENST00000343575 PPP1R7Q15435 360 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 SNCBQ16143 134 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 SLC45A4Q5BKX6 768 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 CEP85LQ5SZL2 805 aa15.07■□□□□ 0
CXCL12-201ENST00000343575 ADGRF1Q5T601 910 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms