RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DGLUCYQ7Z3D6 616 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 ZNF683Q8IZ20 524 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 FOXJ1Q92949 421 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 ZNF419Q96HQ0 510 aaPredicted RBP28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 NUP58Q9BVL2 599 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 AIPL1Q9NZN9 384 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 PILRBQ9UKJ0 227 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 TBC1D30Q9Y2I9 924 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 SNX10Q9Y5X0 201 aa28.43■■■□□ 2.14
ATPAF1-201ENST00000329231 NUP205Q92621 2012 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 SIGLEC16A6NMB1 481 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 DRGXA6NNA5 263 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 GJB6O95452 261 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 ITPKAP23677 461 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 C15orf59Q2T9L4 293 aaPredicted RBP28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 ARL13BQ3SXY8 428 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 STRADAQ7RTN6 431 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 HSPA12BQ96MM6 686 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 FEM1AQ9BSK4 669 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 SYT11Q9BT88 431 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 TMPRSS4Q9NRS4 437 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 RXFP3Q9NSD7 469 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 EVLQ9UI08 416 aaPredicted RBP28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 ITIH6Q6UXX5 1313 aa28.42■■■□□ 2.14
ATPAF1-201ENST00000329231 EDDM13A0A1B0GTR0 161 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 TARSL2A2RTX5 802 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 E9PAM4 449 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 CNTN5O94779 1100 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 DNTTP04053 509 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 RFC1P35251 1148 aaPredicted RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 UBASH3AP57075 661 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 RPS14P62263 151 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 FIGNQ5HY92 759 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 SYCP2LQ5T4T6 812 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 PEAR1Q5VY43 1037 aaPredicted RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 ZNF776Q68DI1 518 aaPredicted RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 DNAJC24Q6P3W2 148 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 SLC41A1Q8IVJ1 513 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 ALG14Q96F25 216 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 RPL10LQ96L21 214 aaKnown RBP28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 TTYH3Q9C0H2 523 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 MTG2Q9H4K7 406 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 TMEM74BQ9NUR3 256 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 SLCO3A1Q9UIG8 710 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 VPS28Q9UK41 221 aa28.41■■■□□ 2.14
ATPAF1-201ENST00000329231 IGLV3-10A0A075B6K4 115 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 ANKRD62A6NC57 917 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 TTC34A8MYJ7 566 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 PATE3B3GLJ2 98 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 RNASEH1O60930 286 aaKnown RBP28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 SIN3BO75182 1162 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 GPD1P21695 349 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 TTC31Q49AM3 519 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 ALFQ53S48 1182 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 SH3PXD2AQ5TCZ1 1133 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 WDR59Q6PJI9 974 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 LRSAM1Q6UWE0 723 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 RABEPKQ7Z6M1 372 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 SETD3Q86TU7 594 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 MCOLN2Q8IZK6 566 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 CADM4Q8NFZ8 388 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 CEP76Q8TAP6 659 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 CENPIQ92674 756 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 EDEM2Q9BV94 578 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 GPR174Q9BXC1 333 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 MUC3BQ9H195 1237 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 RSPH9Q9H1X1 276 aaPredicted RBP28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 HAUS4Q9H6D7 363 aa28.4■■■□□ 2.14
ATPAF1-201ENST00000329231 SRGAP2O75044 1071 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 RHOCP08134 193 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 ADRA1BP35368 520 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 PRKCIP41743 596 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 TRIM61Q5EBN2 209 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 WDR45BQ5MNZ6 344 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 C9orf64Q5T6V5 341 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 STPG1Q5TH74 334 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 OR52K2Q8NGK3 314 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 FAM172AQ8WUF8 416 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 VCPIP1Q96JH7 1222 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 NUSAP1Q9BXS6 441 aaKnown RBP28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 TSPY26PQ9H489 355 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 MPP6Q9NZW5 540 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 SLC25A13Q9UJS0 675 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 SCML1Q9UN30 329 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 OR51B4Q9Y5P0 310 aa28.39■■■□□ 2.14
ATPAF1-201ENST00000329231 ATXN2Q99700 1313 aaKnown RBP28.39■■■□□ 2.13
ATPAF1-201ENST00000329231 TCRBV5S1A1TA0A578 114 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 LNP1A1A4G5 178 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 NUMBP49757 651 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 STK19P49842 368 aaPredicted RBP28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 VASPP50552 380 aaPredicted RBP28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 IRX4P78413 519 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 KLHL30Q0D2K2 578 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 DUOXA1Q1HG43 343 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 C6orf118Q5T5N4 469 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 IL31Q6EBC2 164 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 FAM124AQ86V42 546 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 RGL4Q8IZJ4 473 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 DCHS1Q96JQ0 3298 aa28.38■■■□□ 2.13
ATPAF1-201ENST00000329231 GON4LQ3T8J9 2241 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms