RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ANKRD22Q5VYY1 191 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 ZNF470Q6ECI4 717 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 HOMEZQ8IX15 550 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 OTUD5Q96G74 571 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 SNX15Q9NRS6 342 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 CYP1A1P04798 512 aaPredicted RBP19.66■□□□□ 0.74
USP48-201ENST00000308271 HIST1H2AGP0C0S8 130 aaPredicted RBP19.66■□□□□ 0.74
USP48-201ENST00000308271 HIST1H2ADP20671 130 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 LIPMQ5VYY2 423 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 IL31Q6EBC2 164 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 SFRP1Q8N474 314 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 ENDOVQ8N8Q3 282 aaKnown RBP19.66■□□□□ 0.74
USP48-201ENST00000308271 HIST1H2AHQ96KK5 128 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 HIST1H2AJQ99878 128 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 H2AFJQ9BTM1 129 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 SH3GLB1Q9Y371 365 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 PMM2O15305 246 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 CABYRO75952 493 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 PLIN5Q00G26 463 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 IL5RAQ01344 420 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 EPS8Q12929 822 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 PLEKHG4BQ96PX9 1271 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 FAM198AQ9UFP1 575 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 TUBGCP4Q9UGJ1 667 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 TEKT2Q9UIF3 430 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
USP48-201ENST00000308271 A0A087X1B8 175 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 BNIP3LO60238 219 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
USP48-201ENST00000308271 DSG3P32926 999 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 DNERQ8NFT8 737 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 OR52K1Q8NGK4 314 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 BBS2Q9BXC9 721 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 TBC1D13Q9NVG8 400 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 PRKAG3Q9UGI9 489 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 POLG2Q9UHN1 485 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 ATP5F1P24539 256 aaPredicted RBP19.65■□□□□ 0.74
USP48-201ENST00000308271 YY1P25490 414 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 PSMB9P28065 219 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 PRDX6P30041 224 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 SOX6P35712 828 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 VSIG10LQ86VR7 867 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 ZDHHC13Q8IUH4 622 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 TNS4Q8IZW8 715 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 SVOPQ8N4V2 548 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 JOSD2Q8TAC2 188 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 ASIC4Q96FT7 647 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 FAM95CA0A1B0GW59 222 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 VPS4BO75351 444 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 VPS26AO75436 327 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 ABCG1P45844 678 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 USP46P62068 366 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 KIAA1841Q6NSI8 718 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 NT5DC4Q86YG4 428 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 BLOC1S5Q8TDH9 187 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
USP48-201ENST00000308271 PARVBQ9HBI1 364 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 MYOZ2Q9NPC6 264 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 GIMAP4Q9NUV9 329 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 IMPAD1Q9NX62 359 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 CIDEBQ9UHD4 219 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 ASNA1O43681 348 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 FAM155BO75949 473 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 TGFB3P10600 412 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 ECHS1P30084 290 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 NR1D2Q14995 579 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 PTRHD1Q6GMV3 140 aaKnown RBP19.65■□□□□ 0.74
USP48-201ENST00000308271 AMIGO2Q86SJ2 522 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 FAM83AQ86UY5 434 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 DEFB106AQ8N104 65 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 SLC7A8Q9UHI5 535 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 COQ4Q9Y3A0 265 aa19.65■□□□□ 0.74
USP48-201ENST00000308271 MTF2Q9Y483 593 aaPredicted RBP19.65■□□□□ 0.74
USP48-201ENST00000308271 GOLGA8TH3BQL2 631 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 VWA5AO00534 786 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 CSDE1O75534 798 aaKnown RBP19.64■□□□□ 0.74
USP48-201ENST00000308271 MMP14P50281 582 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 TMEM62Q0P6H9 643 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 BROXQ5VW32 411 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 UGT3A1Q6NUS8 523 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 SETD9Q8NE22 299 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 UGT2B28Q9BY64 529 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 LHX5Q9H2C1 402 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 MID1IP1Q9NPA3 183 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 SLC8A2Q9UPR5 921 aa19.64■□□□□ 0.74
USP48-201ENST00000308271 LACTBL1A8MY62 500 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 TKTP29401 623 aaKnown RBP19.64■□□□□ 0.73
USP48-201ENST00000308271 MAPK10P53779 464 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 TTC23Q5W5X9 447 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 OR6J1Q8NGC5 347 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 MAGEE2Q8TD90 523 aaPredicted RBP19.64■□□□□ 0.73
USP48-201ENST00000308271 ZNF384Q8TF68 577 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 SLC10A4Q96EP9 437 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 MARK4Q96L34 752 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 DEFB129Q9H1M3 183 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 UNGP13051 313 aaPredicted RBP19.64■□□□□ 0.73
USP48-201ENST00000308271 SGO1Q5FBB7 561 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 FAM183BPQ6ZVS7 135 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 ADGRF2Q8IZF7 708 aa19.64■□□□□ 0.73
USP48-201ENST00000308271 EFHBQ8N7U6 833 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms