RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ARHGAP28Q9P2N2 729 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 PRKAG3Q9UGI9 489 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
HDGFL3-201ENST00000299633 DPYSL4O14531 572 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FAAH2Q6GMR7 532 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 TC2NQ8N9U0 490 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CPVLQ9H3G5 476 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 BPNT1O95861 308 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PCNAP12004 261 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF12P17014 697 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 RGS8P57771 180 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PYDC1Q8WXC3 89 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 AGPAT5Q9NUQ2 364 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 UMPSP11172 480 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SRFBP1Q8NEF9 429 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CRELD1Q96HD1 420 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SERPINF2P08697 491 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 DBTP11182 482 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MROH9Q5TGP6 573 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 GPRC5DQ9NZD1 345 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PAK5Q9P286 719 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CORO1CQ9ULV4 474 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 AGKQ53H12 422 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FGD3Q5JSP0 725 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 GPALPP1Q8IXQ4 340 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ITFG1Q8TB96 612 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 DNAJA4Q8WW22 397 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ACOT12Q8WYK0 555 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 EZH1Q92800 747 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MIEF1Q9NQG6 463 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PNPLA3Q9NST1 481 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ADPRHL2Q9NX46 363 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 EIF3KQ9UBQ5 218 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MEMO1Q9Y316 297 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MUSKO15146 869 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 HIST1H2ABP04908 130 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 DENND1BQ6P3S1 775 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 HIST3H2AQ7L7L0 130 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SMG7Q92540 1137 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 HIST1H2ACQ93077 130 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CCDC17Q96LX7 622 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FRMD8Q9BZ67 464 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FCER1AP12319 257 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 RIPK1Q13546 671 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SPIDRQ14159 915 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 KLHL5Q96PQ7 755 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 A0A1B0GTH6 734 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 TMEM114B3SHH9 223 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 TKTP29401 623 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 PEX3P56589 373 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 KLHL35Q6PF15 583 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM111AQ96PZ2 611 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF341Q9BYN7 854 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SUPT7LO94864 414 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC35G2Q8TBE7 412 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 LIN37Q96GY3 246 aaPredicted RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 OPLAHO14841 1288 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MAGEB3O15480 346 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 ORC5O43913 435 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 RAB4AP20338 218 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 LSM3P62310 102 aaKnown RBP11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 KCNB2Q92953 911 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 MAU2Q9Y6X3 613 aa11.37□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM240BA0A1B0GVZ2 78 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 SNAP91O60641 907 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 TTLL9Q3SXZ7 439 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 ANO7Q6IWH7 933 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 ERLEC1Q96DZ1 483 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 ISCUQ9H1K1 167 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 GRHL1Q9NZI5 618 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 PKDREJQ9NTG1 2253 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 PLEKP08567 350 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 EPHB2P29323 1055 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 PTPN5P54829 565 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 HKDC1Q2TB90 917 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 HECTD3Q5T447 861 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 ENOSF1Q7L5Y1 443 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 C11orf70Q9BRQ4 267 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 CCNE2O96020 404 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 NT5DC4Q86YG4 428 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 EGFL6Q8IUX8 553 aa11.36□□□□□ -0.59
HDGFL3-201ENST00000299633 HPS3Q969F9 1004 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms