RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 EIF2AK1Q9BQI3 630 aaKnown RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 GPR63Q9BZJ6 419 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 TLR8Q9NR97 1041 aaKnown RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 TMEM248Q9NWD8 314 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 KLQ9UEF7 1012 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 WDR17Q8IZU2 1322 aa4.9□□□□□ -1.63
CCDC54-201ENST00000261058 CCDC196A0A1B0GTZ2 297 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 SLC22A23A1A5C7 686 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 CGB1A6NKQ9 187 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 KLK10O43240 276 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 RNF8O76064 485 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 PKMP14618 531 aaKnown RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ST6GAL1P15907 406 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 CERS1P27544 350 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 TUBP50607 506 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ZBTB16Q05516 673 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 TBL3Q12788 808 aaKnown RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 EARS2Q5JPH6 523 aaKnown RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 RETSATQ6NUM9 610 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 C16orf71Q8IYS4 520 aaPredicted RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ANKRD44Q8N8A2 993 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 C2CD4CQ8TF44 421 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 PIGKQ92643 395 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 PKNOX2Q96KN3 472 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 MAF1Q9H063 256 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 STN1Q9H668 368 aaKnown RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 IFT80Q9P2H3 777 aaPredicted RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ANAPC4Q9UJX5 808 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 USP12O75317 370 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 BCAR3O75815 825 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 WNT1P04628 370 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 TFEBP19484 476 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 PSMC2P35998 433 aaKnown RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 GJC1P36383 396 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 LIFRP42702 1097 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 OAZ1P54368 228 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 TBX2Q13207 712 aaPredicted RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 MTA1Q13330 715 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 CEP78Q5JTW2 689 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 KIAA1614Q5VZ46 1190 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 SLC30A9Q6PML9 568 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 FAM47BQ8NA70 645 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 KCNJ9Q92806 393 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 ZG16BQ96DA0 208 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 RNFT2Q96EX2 444 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 FRMD8Q9BZ67 464 aaPredicted RBP4.89□□□□□ -1.63
CCDC54-201ENST00000261058 TRIM31Q9BZY9 425 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 Q9N2J8 555 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 UBN1Q9NPG3 1134 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 HDAC6Q9UBN7 1215 aa4.89□□□□□ -1.63
CCDC54-201ENST00000261058 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 MASP2O00187 686 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 PPP6CO00743 305 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 CYP4B1P13584 511 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 CPA1P15085 419 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 TYK2P29597 1187 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 SLC12A2P55011 1212 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 MAPK7Q13164 816 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 ZNF268Q14587 947 aaPredicted RBP4.88□□□□□ -1.63
CCDC54-201ENST00000261058 DAZAP2Q15038 168 aaPredicted RBP4.88□□□□□ -1.63
CCDC54-201ENST00000261058 PGM5Q15124 567 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 SMN1Q16637 294 aaKnown RBP4.88□□□□□ -1.63
CCDC54-201ENST00000261058 RUNDC3AQ59EK9 446 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 NAA35Q5VZE5 725 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 GJB7Q6PEY0 223 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 DEF8Q6ZN54 512 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 BRSK2Q8IWQ3 736 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 TSPYL6Q8N831 410 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 KAT2BQ92831 832 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 ADAD1Q96M93 576 aaKnown RBP4.88□□□□□ -1.63
CCDC54-201ENST00000261058 CLSTN3Q9BQT9 956 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 AGXT2Q9BYV1 514 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 TAOK3Q9H2K8 898 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 SLITRK6Q9H5Y7 841 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 PDGFCQ9NRA1 345 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.88□□□□□ -1.63
CCDC54-201ENST00000261058 HSF4Q9ULV5 492 aa4.88□□□□□ -1.63
CCDC54-201ENST00000261058 CYP2D7A0A087X1C5 515 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 J3KRW8 73 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 CD53P19397 219 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 ATP5F1P24539 256 aaPredicted RBP4.87□□□□□ -1.63
CCDC54-201ENST00000261058 MTNR1AP48039 350 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 NR1H2P55055 460 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 ARHGAP8P85298 464 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 BAK1Q16611 211 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 PLK5Q496M5 336 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 AADACL2Q6P093 401 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 LRRC8DQ7L1W4 858 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 SH3KBP1Q96B97 665 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 NAP1L4Q99733 375 aaKnown RBP4.87□□□□□ -1.63
CCDC54-201ENST00000261058 FAM118BQ9BPY3 351 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 PIMREGQ9BSJ6 248 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 FUZQ9BT04 418 aa4.87□□□□□ -1.63
CCDC54-201ENST00000261058 MOV10Q9HCE1 1003 aaKnown RBP4.87□□□□□ -1.63
CCDC54-201ENST00000261058 ADARB2Q9NS39 739 aaKnown RBP4.87□□□□□ -1.63
CCDC54-201ENST00000261058 TBX20Q9UMR3 447 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms