RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 IFT43Q96FT9 208 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ATXN7L3BQ96GX2 97 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 SLC2A13Q96QE2 648 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 AGAP2Q99490 1192 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 LRRC4Q9HBW1 653 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 VANGL2Q9ULK5 521 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 BUD23O43709 281 aaKnown RBP15.59■□□□□ 0.09
DDX56-201ENST00000258772 SMIM24O75264 130 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 KCNE1P15382 129 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ERCC2P18074 760 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ADRA1BP35368 520 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 SERPINB8P50452 374 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 BTKQ06187 659 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 XKR4Q5GH76 650 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
DDX56-201ENST00000258772 RNF169Q8NCN4 708 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ACTRT2Q8TDY3 377 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 ZNF483Q8TF39 744 aaPredicted RBP15.59■□□□□ 0.09
DDX56-201ENST00000258772 KCTD13Q8WZ19 329 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 AZIN2Q96A70 460 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 SHCBP1LQ9BZQ2 653 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 LOC100653049A0A140TA62 436 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 ZCWPW2A0A1B0GU75 182 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 G3V2L1 256 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 KRT34O76011 436 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 PTPN1P18031 435 aaKnown RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 WARSP23381 471 aaKnown RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 AXLP30530 894 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 EPHB1P54762 984 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 USP4Q13107 963 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 SNAPC2Q13487 334 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 ANKRD20A4Q4UJ75 823 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 NAPRTQ6XQN6 538 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 PDZD4Q76G19 769 aaPredicted RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 PHTF2Q8N3S3 785 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 DNAAF3Q8N9W5 541 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 PHC3Q8NDX5 983 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 PYDC1Q8WXC3 89 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 OXCT2Q9BYC2 517 aaPredicted RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 COG4Q9H9E3 785 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 CDH22Q9UJ99 828 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
DDX56-201ENST00000258772 CDY2AQ9Y6F7 541 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 CDY1Q9Y6F8 540 aa15.58■□□□□ 0.08
DDX56-201ENST00000258772 SORBS2O94875 1100 aaKnown RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 MPOP05164 745 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 F7P08709 466 aaPredicted RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 ACAT1P24752 427 aaKnown RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 CDC16Q13042 620 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 FRG1Q14331 258 aaKnown RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 HSP90AA5PQ58FG0 334 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 KCTD11Q693B1 232 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 EPGNQ6UW88 154 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CLEC20AQ6ZU45 233 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 TOP6BLQ8N6T0 577 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 ZNF781Q8N8C0 355 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 GTF3C2Q8WUA4 911 aaPredicted RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 SLC9A7Q96T83 725 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 TSC22D3Q99576 134 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CDH19Q9H159 772 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CYP4F11Q9HBI6 524 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CASS4Q9NQ75 786 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 SHROOM3Q8TF72 1996 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 A0A096LPK6 155 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 SMIM35A0A1B0GVV1 85 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 ZBTB24O43167 697 aaPredicted RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 DCXO43602 365 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 STRNO43815 780 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 PDE5AO76074 875 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 FYNP06241 537 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 FESP07332 822 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 UBTFL6P0CB48 400 aaPredicted RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 CYP2C9P11712 490 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 PPIDQ08752 370 aaKnown RBP15.57■□□□□ 0.08
DDX56-201ENST00000258772 SEMA3BQ13214 749 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CCNIQ14094 377 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 RNF111Q6ZNA4 994 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 RAPH1Q70E73 1250 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CLEC14AQ86T13 490 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 SLC7A14Q8TBB6 771 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 TMEM40Q8WWA1 233 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 MFSD3Q96ES6 412 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 CAB39LQ9H9S4 337 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 ANLNQ9NQW6 1124 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 NRCAMQ92823 1304 aa15.57■□□□□ 0.08
DDX56-201ENST00000258772 I6L893 689 aaPredicted RBP15.56■□□□□ 0.08
DDX56-201ENST00000258772 NRP1O14786 923 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 NCAM2O15394 837 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 TRIM13O60858 407 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 HSPA4LO95757 839 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 LYNP07948 512 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 SMIM10L2AP0DMW4 78 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 SMIM10L2BP0DMW5 78 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 ITGAXP20702 1163 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 CD68P34810 354 aaPredicted RBP15.56■□□□□ 0.08
DDX56-201ENST00000258772 TKTL1P51854 596 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 IRF9Q00978 393 aa15.56■□□□□ 0.08
DDX56-201ENST00000258772 ASPHQ12797 758 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms