RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 RASSF7Q02833 373 aa6.98□□□□□ -1.29
SAMMSON-213ENST00000641336 ZNF622Q969S3 477 aaKnown RBP eCLIP6.98□□□□□ -1.29
SAMMSON-213ENST00000641336 H3BM21 787 aa6.97□□□□□ -1.29
SAMMSON-213ENST00000641336 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
SAMMSON-213ENST00000641336 CERKQ8TCT0 537 aa6.97□□□□□ -1.29
SAMMSON-213ENST00000641336 CHMP4BQ9H444 224 aaKnown RBP6.97□□□□□ -1.29
SAMMSON-213ENST00000641336 KCNG1Q9UIX4 513 aa6.97□□□□□ -1.29
SAMMSON-213ENST00000641336 HS6ST3Q8IZP7 471 aa6.96□□□□□ -1.29
SAMMSON-213ENST00000641336 RB1CC1Q8TDY2 1594 aa6.96□□□□□ -1.29
SAMMSON-213ENST00000641336 SLC6A16Q9GZN6 736 aa6.96□□□□□ -1.29
SAMMSON-213ENST00000641336 TTC24A2A3L6 582 aaPredicted RBP6.96□□□□□ -1.3
SAMMSON-213ENST00000641336 SMPD1P17405 629 aa6.96□□□□□ -1.3
SAMMSON-213ENST00000641336 LOC102724159A0A0B4J2E5 919 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 VEGFBP49765 207 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 PWP2Q15269 919 aaKnown RBP6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 TMTC2Q8N394 836 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 RIPOR2Q9Y4F9 1068 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 CADPSQ9ULU8 1353 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 UNC13AQ9UPW8 1703 aa6.95□□□□□ -1.3
SAMMSON-213ENST00000641336 AXDND1Q5T1B0 1012 aaPredicted RBP6.94□□□□□ -1.3
SAMMSON-213ENST00000641336 ANKRD13AQ8IZ07 590 aa6.94□□□□□ -1.3
SAMMSON-213ENST00000641336 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
SAMMSON-213ENST00000641336 LAS1LQ9Y4W2 734 aaKnown RBP6.94□□□□□ -1.3
SAMMSON-213ENST00000641336 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
SAMMSON-213ENST00000641336 RSF1Q96T23 1441 aaPredicted RBP6.93□□□□□ -1.3
SAMMSON-213ENST00000641336 PATL2C9JE40 543 aaKnown RBP6.92□□□□□ -1.3
SAMMSON-213ENST00000641336 SLC4A3P48751 1232 aa6.92□□□□□ -1.3
SAMMSON-213ENST00000641336 SPTY2D1Q68D10 685 aaPredicted RBP6.92□□□□□ -1.3
SAMMSON-213ENST00000641336 NOL8Q76FK4 1167 aaKnown RBP6.92□□□□□ -1.3
SAMMSON-213ENST00000641336 FAM50AQ14320 339 aaKnown RBP6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 ANP32BQ92688 251 aaKnown RBP6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 MYH16Q9H6N6 1097 aa6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 DPYSL4O14531 572 aa6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 IGHA1P01876 353 aa6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 MMP14P50281 582 aa6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 CCDC82Q8N4S0 544 aa6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 RYDENQ9NUL5 291 aaKnown RBP6.91□□□□□ -1.3
SAMMSON-213ENST00000641336 NEUROD1Q13562 356 aa6.9□□□□□ -1.31
SAMMSON-213ENST00000641336 NKX1-1Q15270 411 aaPredicted RBP6.9□□□□□ -1.31
SAMMSON-213ENST00000641336 ACTN4O43707 911 aaKnown RBP6.89□□□□□ -1.31
SAMMSON-213ENST00000641336 GPAT2Q6NUI2 795 aa6.89□□□□□ -1.31
SAMMSON-213ENST00000641336 SNIP1Q8TAD8 396 aaKnown RBP6.89□□□□□ -1.31
SAMMSON-213ENST00000641336 RBM27Q9P2N5 1060 aaKnown RBP6.89□□□□□ -1.31
SAMMSON-213ENST00000641336 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
SAMMSON-213ENST00000641336 TRIM44Q96DX7 344 aaPredicted RBP6.88□□□□□ -1.31
SAMMSON-213ENST00000641336 WIZO95785 1651 aa6.88□□□□□ -1.31
SAMMSON-213ENST00000641336 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
SAMMSON-213ENST00000641336 MROH2BQ7Z745 1585 aa6.87□□□□□ -1.31
SAMMSON-213ENST00000641336 CECR2Q9BXF3 1484 aa6.87□□□□□ -1.31
SAMMSON-213ENST00000641336 J3QL48 77 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 CEP120Q8N960 986 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 BAZ1AQ9NRL2 1556 aaPredicted RBP6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 TTC36A6NLP5 189 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 TTC13Q8NBP0 860 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 HPS1Q92902 700 aa6.86□□□□□ -1.31
SAMMSON-213ENST00000641336 NR1I2O75469 434 aa6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 BRD1O95696 1058 aa6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 ERCC3P19447 782 aa6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 PRIM1P49642 420 aaKnown RBP6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 CASC1Q6TDU7 716 aa6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 CCER1Q8TC90 406 aaPredicted RBP6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
SAMMSON-213ENST00000641336 WNT7AO00755 349 aa6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 NBPF11Q86T75 865 aa6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 SGSM3Q96HU1 749 aa6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 DNMT3AQ9Y6K1 912 aaPredicted RBP6.84□□□□□ -1.31
SAMMSON-213ENST00000641336 TPD52L2O43399 206 aaKnown RBP6.83□□□□□ -1.32
SAMMSON-213ENST00000641336 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
SAMMSON-213ENST00000641336 CALRP27797 417 aaKnown RBP6.83□□□□□ -1.32
SAMMSON-213ENST00000641336 KMT5BQ4FZB7 885 aa6.83□□□□□ -1.32
SAMMSON-213ENST00000641336 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
SAMMSON-213ENST00000641336 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 ADAM23O75077 832 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 EYA1Q99502 592 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 TERF2IPQ9NYB0 399 aa6.82□□□□□ -1.32
SAMMSON-213ENST00000641336 FCF1Q9Y324 198 aaKnown RBP6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 SMARCA4P51532 1647 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 MARCH6O60337 910 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 RALBP1Q15311 655 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 RINLQ6ZS11 566 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 HDAC5Q9UQL6 1122 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 PPME1Q9Y570 386 aa6.81□□□□□ -1.32
SAMMSON-213ENST00000641336 FOXK2Q01167 660 aa6.8□□□□□ -1.32
SAMMSON-213ENST00000641336 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
SAMMSON-213ENST00000641336 SPSB2Q99619 263 aa6.8□□□□□ -1.32
SAMMSON-213ENST00000641336 CDHR5Q9HBB8 845 aa6.8□□□□□ -1.32
SAMMSON-213ENST00000641336 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
SAMMSON-213ENST00000641336 ANP32CO43423 234 aa6.79□□□□□ -1.32
SAMMSON-213ENST00000641336 NRDCO43847 1150 aa6.79□□□□□ -1.32
SAMMSON-213ENST00000641336 CALD1Q05682 793 aaKnown RBP6.79□□□□□ -1.32
SAMMSON-213ENST00000641336 MYBPC2Q14324 1141 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms