RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 CABLES1Q8TDN4 633 aa5.74□□□□□ -1.49
GYPB-216ENST00000638448 FAM117AQ9C073 453 aa5.74□□□□□ -1.49
GYPB-216ENST00000638448 ALDH1A1P00352 501 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 HRCP23327 699 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 KCNH2Q12809 1159 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 FLIIQ13045 1269 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 MYSM1Q5VVJ2 828 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 RIC3Q7Z5B4 369 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 ZBTB3Q9H5J0 574 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 EVA1BQ9NVM1 165 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 LIMD1Q9UGP4 676 aa5.73□□□□□ -1.49
GYPB-216ENST00000638448 SIAH2O43255 324 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 BAP1Q92560 729 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 ZMYND15Q9H091 742 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 RSPH6AQ9H0K4 717 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 ATP13A2Q9NQ11 1180 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 TLL2Q9Y6L7 1015 aa5.72□□□□□ -1.49
GYPB-216ENST00000638448 QPCTQ16769 361 aa5.71□□□□□ -1.5
GYPB-216ENST00000638448 PRPF38BQ5VTL8 546 aaKnown RBP5.71□□□□□ -1.5
GYPB-216ENST00000638448 LYPD8Q6UX82 237 aa5.71□□□□□ -1.5
GYPB-216ENST00000638448 ZNF511Q8NB15 262 aa5.71□□□□□ -1.5
GYPB-216ENST00000638448 MAP10Q9P2G4 905 aa5.71□□□□□ -1.5
GYPB-216ENST00000638448 C11orf95C9JLR9 678 aaPredicted RBP5.7□□□□□ -1.5
GYPB-216ENST00000638448 F12P00748 615 aaPredicted RBP5.7□□□□□ -1.5
GYPB-216ENST00000638448 CTHP32929 405 aa5.7□□□□□ -1.5
GYPB-216ENST00000638448 PER1O15534 1290 aaPredicted RBP5.69□□□□□ -1.5
GYPB-216ENST00000638448 TSC1Q92574 1164 aa5.69□□□□□ -1.5
GYPB-216ENST00000638448 WASF2Q9Y6W5 498 aa5.69□□□□□ -1.5
GYPB-216ENST00000638448 SNRPBP14678 240 aaKnown RBP5.68□□□□□ -1.5
GYPB-216ENST00000638448 CLK2P49760 499 aaKnown RBP5.68□□□□□ -1.5
GYPB-216ENST00000638448 SH3D19Q5HYK7 790 aa5.68□□□□□ -1.5
GYPB-216ENST00000638448 NUTM2BA6NNL0 878 aaPredicted RBP5.67□□□□□ -1.5
GYPB-216ENST00000638448 NUTM2EB1AL46 878 aaPredicted RBP5.67□□□□□ -1.5
GYPB-216ENST00000638448 LILRB3O75022 631 aa5.67□□□□□ -1.5
GYPB-216ENST00000638448 BMP1P13497 986 aa5.67□□□□□ -1.5
GYPB-216ENST00000638448 TUSC1Q2TAM9 212 aa5.67□□□□□ -1.5
GYPB-216ENST00000638448 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
GYPB-216ENST00000638448 NUTM2DQ5VT03 806 aaPredicted RBP5.67□□□□□ -1.5
GYPB-216ENST00000638448 NUTM2AQ8IVF1 878 aaPredicted RBP5.67□□□□□ -1.5
GYPB-216ENST00000638448 FOXJ1Q92949 421 aa5.67□□□□□ -1.5
GYPB-216ENST00000638448 TRIM47Q96LD4 638 aa5.67□□□□□ -1.5
GYPB-216ENST00000638448 SUPT5HO00267 1087 aaKnown RBP5.66□□□□□ -1.5
GYPB-216ENST00000638448 VARSP26640 1264 aaKnown RBP5.66□□□□□ -1.5
GYPB-216ENST00000638448 RTL5Q5HYW3 569 aaPredicted RBP5.66□□□□□ -1.5
GYPB-216ENST00000638448 TREML4Q6UXN2 200 aa5.66□□□□□ -1.5
GYPB-216ENST00000638448 CAPN5O15484 640 aaPredicted RBP5.65□□□□□ -1.5
GYPB-216ENST00000638448 NNTQ13423 1086 aa5.65□□□□□ -1.5
GYPB-216ENST00000638448 TRIM46Q7Z4K8 759 aa5.65□□□□□ -1.5
GYPB-216ENST00000638448 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
GYPB-216ENST00000638448 SENP2Q9HC62 589 aa5.65□□□□□ -1.5
GYPB-216ENST00000638448 POLR3EQ9NVU0 708 aa5.65□□□□□ -1.5
GYPB-216ENST00000638448 A6NJR5 290 aa5.64□□□□□ -1.51
GYPB-216ENST00000638448 C4orf48Q5BLP8 95 aa5.64□□□□□ -1.51
GYPB-216ENST00000638448 HELBQ8NG08 1087 aaPredicted RBP5.64□□□□□ -1.51
GYPB-216ENST00000638448 FAM174AQ8TBP5 190 aa5.64□□□□□ -1.51
GYPB-216ENST00000638448 ADH1CP00326 375 aa5.63□□□□□ -1.51
GYPB-216ENST00000638448 NFX1Q12986 1120 aaKnown RBP5.63□□□□□ -1.51
GYPB-216ENST00000638448 MPNDQ8N594 471 aa5.63□□□□□ -1.51
GYPB-216ENST00000638448 KIFC2Q96AC6 838 aa5.63□□□□□ -1.51
GYPB-216ENST00000638448 WFS1O76024 890 aa5.62□□□□□ -1.51
GYPB-216ENST00000638448 TIMP2P16035 220 aa5.62□□□□□ -1.51
GYPB-216ENST00000638448 ARID5BQ14865 1188 aa5.62□□□□□ -1.51
GYPB-216ENST00000638448 AGERQ15109 404 aa5.62□□□□□ -1.51
GYPB-216ENST00000638448 SKIV2LQ15477 1246 aaKnown RBP5.62□□□□□ -1.51
GYPB-216ENST00000638448 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
GYPB-216ENST00000638448 FBXO31Q5XUX0 539 aaPredicted RBP5.62□□□□□ -1.51
GYPB-216ENST00000638448 NR3C2P08235 984 aa5.61□□□□□ -1.51
GYPB-216ENST00000638448 WDR4P57081 412 aaKnown RBP5.61□□□□□ -1.51
GYPB-216ENST00000638448 NBPF14Q5TI25 921 aa5.61□□□□□ -1.51
GYPB-216ENST00000638448 BPHLQ86WA6 291 aaPredicted RBP5.61□□□□□ -1.51
GYPB-216ENST00000638448 CDK15Q96Q40 435 aa5.61□□□□□ -1.51
GYPB-216ENST00000638448 C1QTNF2Q9BXJ5 285 aa5.61□□□□□ -1.51
GYPB-216ENST00000638448 CTDSPL2Q05D32 466 aa5.6□□□□□ -1.51
GYPB-216ENST00000638448 MCM6Q14566 821 aa5.6□□□□□ -1.51
GYPB-216ENST00000638448 SH3BP5LQ7L8J4 393 aa5.6□□□□□ -1.51
GYPB-216ENST00000638448 SH3RF1Q7Z6J0 888 aa5.6□□□□□ -1.51
GYPB-216ENST00000638448 ARMC2Q8NEN0 867 aa5.6□□□□□ -1.51
GYPB-216ENST00000638448 MAGEB6P1A0A0J9YX57 407 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 SOCS7O14512 581 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 TERTO14746 1132 aaKnown RBP5.59□□□□□ -1.51
GYPB-216ENST00000638448 PROCA1Q8NCQ7 364 aaPredicted RBP5.59□□□□□ -1.51
GYPB-216ENST00000638448 LRRN4Q8WUT4 740 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 ZFP42Q96MM3 310 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 KLF16Q9BXK1 252 aaPredicted RBP5.59□□□□□ -1.51
GYPB-216ENST00000638448 CARD14Q9BXL6 1004 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
GYPB-216ENST00000638448 ZIC2O95409 532 aaPredicted RBP5.58□□□□□ -1.52
GYPB-216ENST00000638448 FSHRP23945 695 aa5.58□□□□□ -1.52
GYPB-216ENST00000638448 GRM5P41594 1212 aa5.58□□□□□ -1.52
GYPB-216ENST00000638448 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
GYPB-216ENST00000638448 ITPKCQ96DU7 683 aa5.58□□□□□ -1.52
GYPB-216ENST00000638448 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.58□□□□□ -1.52
GYPB-216ENST00000638448 NR5A1Q13285 461 aa5.57□□□□□ -1.52
GYPB-216ENST00000638448 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
GYPB-216ENST00000638448 BANK1Q8NDB2 785 aa5.57□□□□□ -1.52
GYPB-216ENST00000638448 PURBQ96QR8 312 aaKnown RBP5.57□□□□□ -1.52
GYPB-216ENST00000638448 MAP4K5Q9Y4K4 846 aa5.57□□□□□ -1.52
GYPB-216ENST00000638448 ERFEQ4G0M1 354 aa5.56□□□□□ -1.52
GYPB-216ENST00000638448 PPP2R2DQ66LE6 453 aa5.56□□□□□ -1.52
GYPB-216ENST00000638448 GPKOWQ92917 476 aaPredicted RBP eCLIP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms