RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
SPTAN1-228ENST00000635853 HSP90B2PQ58FF3 399 aa11.74□□□□□ -0.53
SPTAN1-228ENST00000635853 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
SPTAN1-228ENST00000635853 GPATCH11Q8N954 259 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 TNPO1Q92973 898 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 NEUROD6Q96NK8 337 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 ZKSCAN5Q9Y2L8 839 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 REC8O95072 547 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 RABEP1Q15276 862 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 OGFRQ9NZT2 677 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 FEZ1Q99689 392 aa11.73□□□□□ -0.53
SPTAN1-228ENST00000635853 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
SPTAN1-228ENST00000635853 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-228ENST00000635853 RALYLQ86SE5 291 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-228ENST00000635853 XBP1P17861 261 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 CCP110O43303 1012 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 KDM4AO75164 1064 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 KRT222Q8N1A0 295 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 CDC45O75419 566 aa11.71□□□□□ -0.53
SPTAN1-228ENST00000635853 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 PANK1Q8TE04 598 aa11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 PPM1FP49593 454 aaPredicted RBP11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 INTS3Q68E01 1043 aaKnown RBP11.71□□□□□ -0.54
SPTAN1-228ENST00000635853 TXLNBQ8N3L3 684 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 CDK5RAP3Q96JB5 506 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 PDS5BQ9NTI5 1447 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 CLGNO14967 610 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 SYCP1Q15431 976 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 PANK3Q9H999 370 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
SPTAN1-228ENST00000635853 GIMAP7Q8NHV1 300 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 H0YHG0 523 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 SYCE3A1L190 88 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 KRT18P05783 430 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 GABPB1Q06547 395 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 LRRC9Q6ZRR7 1453 aa11.69□□□□□ -0.54
SPTAN1-228ENST00000635853 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 MYO6Q9UM54 1294 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 CAGE1Q8TC20 777 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 ERC2O15083 957 aa11.68□□□□□ -0.54
SPTAN1-228ENST00000635853 MPHOSPH10O00566 681 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 VPS37CA5D8V6 355 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 DHX8Q14562 1220 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 UVSSAQ2YD98 709 aa11.67□□□□□ -0.54
SPTAN1-228ENST00000635853 ZSCAN23Q3MJ62 389 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.543e-7■□□□□ 9.2
SPTAN1-228ENST00000635853 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 MCM2P49736 904 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 APAF1O14727 1248 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 MYRIPQ8NFW9 859 aa11.66□□□□□ -0.54
SPTAN1-228ENST00000635853 PDILTQ8N807 584 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 NEBLO76041 1014 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 ZRSR2Q15696 482 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-228ENST00000635853 PAXBP1Q9Y5B6 917 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms