RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 AAASQ9NRG9 546 aa8.27□□□□□ -1.09
LINC00343-210ENST00000608220 AXIN1O15169 862 aa8.26□□□□□ -1.09
LINC00343-210ENST00000608220 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
LINC00343-210ENST00000608220 SMPD1P17405 629 aa8.26□□□□□ -1.09
LINC00343-210ENST00000608220 SH3BP2P78314 561 aa8.26□□□□□ -1.09
LINC00343-210ENST00000608220 LILRB3O75022 631 aa8.25□□□□□ -1.09
LINC00343-210ENST00000608220 TUSC1Q2TAM9 212 aa8.25□□□□□ -1.09
LINC00343-210ENST00000608220 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
LINC00343-210ENST00000608220 AVPP01185 164 aa8.24□□□□□ -1.09
LINC00343-210ENST00000608220 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
LINC00343-210ENST00000608220 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
LINC00343-210ENST00000608220 DDRGK1Q96HY6 314 aa8.24□□□□□ -1.09
LINC00343-210ENST00000608220 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
LINC00343-210ENST00000608220 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
LINC00343-210ENST00000608220 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
LINC00343-210ENST00000608220 POTECB2RU33 542 aa8.22□□□□□ -1.09
LINC00343-210ENST00000608220 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
LINC00343-210ENST00000608220 DACH1Q9UI36 760 aa8.22□□□□□ -1.09
LINC00343-210ENST00000608220 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
LINC00343-210ENST00000608220 SHROOM4Q9ULL8 1493 aa8.21□□□□□ -1.09
LINC00343-210ENST00000608220 UNC13AQ9UPW8 1703 aa8.21□□□□□ -1.09
LINC00343-210ENST00000608220 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
LINC00343-210ENST00000608220 CRIPAKQ8N1N5 446 aa8.21□□□□□ -1.1
LINC00343-210ENST00000608220 HPS1Q92902 700 aa8.21□□□□□ -1.1
LINC00343-210ENST00000608220 SIAH2O43255 324 aa8.2□□□□□ -1.1
LINC00343-210ENST00000608220 F12P00748 615 aaPredicted RBP8.2□□□□□ -1.1
LINC00343-210ENST00000608220 AGERQ15109 404 aa8.2□□□□□ -1.1
LINC00343-210ENST00000608220 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
LINC00343-210ENST00000608220 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
LINC00343-210ENST00000608220 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
LINC00343-210ENST00000608220 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
LINC00343-210ENST00000608220 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
LINC00343-210ENST00000608220 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
LINC00343-210ENST00000608220 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
LINC00343-210ENST00000608220 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
LINC00343-210ENST00000608220 CTDSPL2Q05D32 466 aa8.17□□□□□ -1.1
LINC00343-210ENST00000608220 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
LINC00343-210ENST00000608220 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
LINC00343-210ENST00000608220 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
LINC00343-210ENST00000608220 ARMC2Q8NEN0 867 aa8.16□□□□□ -1.1
LINC00343-210ENST00000608220 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.1
LINC00343-210ENST00000608220 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
LINC00343-210ENST00000608220 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
LINC00343-210ENST00000608220 BICRAQ9NZM4 1560 aa8.14□□□□□ -1.11
LINC00343-210ENST00000608220 TPRNQ4KMQ1 711 aa8.14□□□□□ -1.11
LINC00343-210ENST00000608220 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
LINC00343-210ENST00000608220 AP1G2O75843 785 aa8.13□□□□□ -1.11
LINC00343-210ENST00000608220 NBPF14Q5TI25 921 aa8.13□□□□□ -1.11
LINC00343-210ENST00000608220 FBXO31Q5XUX0 539 aaPredicted RBP8.13□□□□□ -1.11
LINC00343-210ENST00000608220 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
LINC00343-210ENST00000608220 LRRN4Q8WUT4 740 aa8.13□□□□□ -1.11
LINC00343-210ENST00000608220 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC00343-210ENST00000608220 MAGEB6P1A0A0J9YX57 407 aa8.12□□□□□ -1.11
LINC00343-210ENST00000608220 CAPN5O15484 640 aaPredicted RBP8.12□□□□□ -1.11
LINC00343-210ENST00000608220 DCAF1Q9Y4B6 1507 aa8.12□□□□□ -1.11
LINC00343-210ENST00000608220 NNTQ13423 1086 aa8.11□□□□□ -1.11
LINC00343-210ENST00000608220 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
LINC00343-210ENST00000608220 PPP2R2DQ66LE6 453 aa8.11□□□□□ -1.11
LINC00343-210ENST00000608220 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
LINC00343-210ENST00000608220 MPNDQ8N594 471 aa8.1□□□□□ -1.11
LINC00343-210ENST00000608220 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
LINC00343-210ENST00000608220 SENP2Q9HC62 589 aa8.1□□□□□ -1.11
LINC00343-210ENST00000608220 ADH1CP00326 375 aa8.09□□□□□ -1.11
LINC00343-210ENST00000608220 NR6A1Q15406 480 aa8.09□□□□□ -1.11
LINC00343-210ENST00000608220 ZCCHC6Q5VYS8 1495 aaKnown RBP8.08□□□□□ -1.12
LINC00343-210ENST00000608220 BMP1P13497 986 aa8.08□□□□□ -1.12
LINC00343-210ENST00000608220 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
LINC00343-210ENST00000608220 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
LINC00343-210ENST00000608220 WDR4P57081 412 aaKnown RBP8.08□□□□□ -1.12
LINC00343-210ENST00000608220 CDK15Q96Q40 435 aa8.08□□□□□ -1.12
LINC00343-210ENST00000608220 RFC5P40937 340 aa8.07□□□□□ -1.12
LINC00343-210ENST00000608220 SH3BP5LQ7L8J4 393 aa8.07□□□□□ -1.12
LINC00343-210ENST00000608220 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
LINC00343-210ENST00000608220 TRIM47Q96LD4 638 aa8.07□□□□□ -1.12
LINC00343-210ENST00000608220 FKBPLQ9UIM3 349 aa8.07□□□□□ -1.12
LINC00343-210ENST00000608220 USP17L8P0C7I0 530 aa8.06□□□□□ -1.12
LINC00343-210ENST00000608220 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
LINC00343-210ENST00000608220 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
LINC00343-210ENST00000608220 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
LINC00343-210ENST00000608220 NR5A1Q13285 461 aa8.05□□□□□ -1.12
LINC00343-210ENST00000608220 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
LINC00343-210ENST00000608220 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
LINC00343-210ENST00000608220 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
LINC00343-210ENST00000608220 TIMP2P16035 220 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 FSHRP23945 695 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 GRM5P41594 1212 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 PDXDC2PQ6P474 469 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 ZBTB33Q86T24 672 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 PNMA1Q8ND90 353 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 C1QTNF2Q9BXJ5 285 aa8.04□□□□□ -1.12
LINC00343-210ENST00000608220 ZIC2O95409 532 aaPredicted RBP8.03□□□□□ -1.12
LINC00343-210ENST00000608220 NR3C2P08235 984 aa8.03□□□□□ -1.12
LINC00343-210ENST00000608220 EPS8L1Q8TE68 723 aa8.03□□□□□ -1.12
LINC00343-210ENST00000608220 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
LINC00343-210ENST00000608220 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
LINC00343-210ENST00000608220 PTK2Q05397 1052 aa8.02□□□□□ -1.13
LINC00343-210ENST00000608220 SCARF1Q14162 830 aa8.02□□□□□ -1.13
LINC00343-210ENST00000608220 ERFEQ4G0M1 354 aa8.02□□□□□ -1.13
LINC00343-210ENST00000608220 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
LINC00343-210ENST00000608220 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms