RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 FUT2Q10981 343 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
HMGB1P51-201ENST00000605166 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
HMGB1P51-201ENST00000605166 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 BRD1O95696 1058 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 KCNA1Q09470 495 aa9.53□□□□□ -0.88
HMGB1P51-201ENST00000605166 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
HMGB1P51-201ENST00000605166 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
HMGB1P51-201ENST00000605166 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
HMGB1P51-201ENST00000605166 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
HMGB1P51-201ENST00000605166 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 NR6A1Q15406 480 aa9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
HMGB1P51-201ENST00000605166 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 SCUBE3Q8IX30 993 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
HMGB1P51-201ENST00000605166 ATG7O95352 703 aa9.47□□□□□ -0.89
HMGB1P51-201ENST00000605166 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 EIF4G2P78344 907 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 MAFBQ9Y5Q3 323 aaPredicted RBP9.46□□□□□ -0.9
HMGB1P51-201ENST00000605166 ADH1BP00325 375 aa9.45□□□□□ -0.9
HMGB1P51-201ENST00000605166 Q3C1V9 767 aa9.45□□□□□ -0.9
HMGB1P51-201ENST00000605166 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 MORN1Q5T089 497 aa9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 V9GY48 417 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P51-201ENST00000605166 FMNL1O95466 1100 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 SPSB2Q99619 263 aa9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P51-201ENST00000605166 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 ATP9BO43861 1147 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 NR1H3Q13133 447 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 LYPD8Q6UX82 237 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
HMGB1P51-201ENST00000605166 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
HMGB1P51-201ENST00000605166 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 TLL1O43897 1013 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
HMGB1P51-201ENST00000605166 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
HMGB1P51-201ENST00000605166 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 S1PR4O95977 384 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
HMGB1P51-201ENST00000605166 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
HMGB1P51-201ENST00000605166 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
HMGB1P51-201ENST00000605166 SLC19A1P41440 591 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
HMGB1P51-201ENST00000605166 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P51-201ENST00000605166 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB1P51-201ENST00000605166 CCDC27Q2M243 656 aa9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
HMGB1P51-201ENST00000605166 PIK3CDO00329 1044 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 PTPRNQ16849 979 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L3A6NCW0 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L4A6NCW7 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L1Q7RTZ2 530 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
HMGB1P51-201ENST00000605166 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 GFRA3O60609 400 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 SKIP12755 728 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 JUNDP17535 347 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P51-201ENST00000605166 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
HMGB1P51-201ENST00000605166 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
HMGB1P51-201ENST00000605166 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms