RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 UQCRHP07919 91 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 ENOX2Q16206 610 aaKnown RBP11.43□□□□□ -0.58
CSMD1-217ENST00000602723 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 CENPHQ9H3R5 247 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 HIP1O00291 1037 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
CSMD1-217ENST00000602723 LUC7LQ9NQ29 371 aaKnown RBP11.43□□□□□ -0.58
CSMD1-217ENST00000602723 EIF3JO75822 258 aaKnown RBP11.43□□□□□ -0.58
CSMD1-217ENST00000602723 HMOX1P09601 288 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 STK38Q15208 465 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 TNMDQ9H2S6 317 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 PPFIBP1Q86W92 1011 aa11.43□□□□□ -0.58
CSMD1-217ENST00000602723 CWC22Q9HCG8 908 aaKnown RBP11.43□□□□□ -0.58
CSMD1-217ENST00000602723 RIC3Q7Z5B4 369 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 SEPT7Q16181 437 aaKnown RBP11.42□□□□□ -0.58
CSMD1-217ENST00000602723 CEBPZQ03701 1054 aaKnown RBP11.42□□□□□ -0.58
CSMD1-217ENST00000602723 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 KDM4AO75164 1064 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 ERLIN1O75477 346 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 STIM1Q13586 685 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 TXLNBQ8N3L3 684 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 SERPINC1P01008 464 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 SYCP1Q15431 976 aa11.42□□□□□ -0.58
CSMD1-217ENST00000602723 NEFHP12036 1026 aa11.41□□□□□ -0.58
CSMD1-217ENST00000602723 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
CSMD1-217ENST00000602723 ATP2B1P20020 1258 aa11.41□□□□□ -0.58
CSMD1-217ENST00000602723 PSME1Q06323 249 aa11.41□□□□□ -0.58
CSMD1-217ENST00000602723 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
CSMD1-217ENST00000602723 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
CSMD1-217ENST00000602723 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
CSMD1-217ENST00000602723 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
CSMD1-217ENST00000602723 TAF3Q5VWG9 929 aa11.4□□□□□ -0.58
CSMD1-217ENST00000602723 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
CSMD1-217ENST00000602723 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.58
CSMD1-217ENST00000602723 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.58
CSMD1-217ENST00000602723 ME1P48163 572 aa11.4□□□□□ -0.58
CSMD1-217ENST00000602723 CLASRPQ8N2M8 674 aaKnown RBP11.4□□□□□ -0.58
CSMD1-217ENST00000602723 GRPEL1Q9HAV7 217 aa11.4□□□□□ -0.59
CSMD1-217ENST00000602723 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
CSMD1-217ENST00000602723 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 CCDC181Q5TID7 509 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 ANKRD18AQ8IVF6 992 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 USP8P40818 1118 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 FAM193AP78312 1265 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
CSMD1-217ENST00000602723 EZRP15311 586 aaKnown RBP11.39□□□□□ -0.59
CSMD1-217ENST00000602723 WDR33Q9C0J8 1336 aaKnown RBP11.39□□□□□ -0.59
CSMD1-217ENST00000602723 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
CSMD1-217ENST00000602723 GNAI3P08754 354 aa11.38□□□□□ -0.59
CSMD1-217ENST00000602723 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
CSMD1-217ENST00000602723 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
CSMD1-217ENST00000602723 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 LRRCC1Q9C099 1032 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 ERC1Q8IUD2 1116 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
CSMD1-217ENST00000602723 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
CSMD1-217ENST00000602723 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-217ENST00000602723 MPNDQ8N594 471 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
CSMD1-217ENST00000602723 CYP46A1Q9Y6A2 500 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 KRT85P78386 507 aa11.37□□□□□ -0.59
CSMD1-217ENST00000602723 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 ANKRD62A6NC57 917 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 TAX1BP1Q86VP1 789 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 GBP2P32456 591 aaPredicted RBP11.36□□□□□ -0.59
CSMD1-217ENST00000602723 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
CSMD1-217ENST00000602723 K7ELQ4 463 aaPredicted RBP11.35□□□□□ -0.59
CSMD1-217ENST00000602723 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 ADAMTS8Q9UP79 889 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 KIF21BO75037 1637 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 LRRFIP2Q9Y608 721 aaKnown RBP11.35□□□□□ -0.59
CSMD1-217ENST00000602723 GNAI2P04899 355 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 DYDC1Q8WWB3 177 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
CSMD1-217ENST00000602723 ESPNB1AK53 854 aa11.34□□□□□ -0.59
CSMD1-217ENST00000602723 CEP57L1Q8IYX8 460 aa11.34□□□□□ -0.59
CSMD1-217ENST00000602723 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
CSMD1-217ENST00000602723 GCC1Q96CN9 775 aa11.34□□□□□ -0.59
CSMD1-217ENST00000602723 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
CSMD1-217ENST00000602723 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
CSMD1-217ENST00000602723 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■■ 29.1
CSMD1-217ENST00000602723 STK3Q13188 491 aa11.33□□□□□ -0.6
CSMD1-217ENST00000602723 WWC2Q6AWC2 1192 aa11.33□□□□□ -0.6
CSMD1-217ENST00000602723 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
CSMD1-217ENST00000602723 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
CSMD1-217ENST00000602723 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
CSMD1-217ENST00000602723 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
CSMD1-217ENST00000602723 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms