RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 A0A0G2JS52 829 aa19.26■□□□□ 0.67
H3F3B-213ENST00000593254 MYT1Q01538 1121 aa19.26■□□□□ 0.67
H3F3B-213ENST00000593254 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
H3F3B-213ENST00000593254 ANKARQ7Z5J8 1434 aa19.25■□□□□ 0.67
H3F3B-213ENST00000593254 ADGRB2O60241 1585 aa19.25■□□□□ 0.67
H3F3B-213ENST00000593254 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
H3F3B-213ENST00000593254 SPATA31A5Q5VU36 1347 aa19.24■□□□□ 0.67
H3F3B-213ENST00000593254 SPATA31A7Q8IWB4 1347 aa19.24■□□□□ 0.67
H3F3B-213ENST00000593254 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
H3F3B-213ENST00000593254 FAM182BQ5T319 152 aa19.23■□□□□ 0.67
H3F3B-213ENST00000593254 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
H3F3B-213ENST00000593254 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
H3F3B-213ENST00000593254 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
H3F3B-213ENST00000593254 POGKQ9P215 609 aa19.21■□□□□ 0.67
H3F3B-213ENST00000593254 KIAA1210Q9ULL0 1709 aa19.21■□□□□ 0.67
H3F3B-213ENST00000593254 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
H3F3B-213ENST00000593254 EZH2Q15910 746 aaKnown RBP19.19■□□□□ 0.66
H3F3B-213ENST00000593254 CAMKK2Q96RR4 588 aa19.19■□□□□ 0.66
H3F3B-213ENST00000593254 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
H3F3B-213ENST00000593254 PRR36Q9H6K5 1346 aa19.15■□□□□ 0.66
H3F3B-213ENST00000593254 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
H3F3B-213ENST00000593254 RREB1Q92766 1687 aa19.14■□□□□ 0.66
H3F3B-213ENST00000593254 UTRNP46939 3433 aa19.14■□□□□ 0.65
H3F3B-213ENST00000593254 SPATA31A1Q5TZJ5 1347 aa19.14■□□□□ 0.65
H3F3B-213ENST00000593254 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
H3F3B-213ENST00000593254 FAM196AQ6ZSG2 479 aa19.13■□□□□ 0.65
H3F3B-213ENST00000593254 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
H3F3B-213ENST00000593254 MINK1Q8N4C8 1332 aaPredicted RBP19.13■□□□□ 0.65
H3F3B-213ENST00000593254 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
H3F3B-213ENST00000593254 TRIM37O94972 964 aa19.12■□□□□ 0.65
H3F3B-213ENST00000593254 PRDM11Q9NQV5 511 aa19.12■□□□□ 0.65
H3F3B-213ENST00000593254 NUP188Q5SRE5 1749 aa19.11■□□□□ 0.65
H3F3B-213ENST00000593254 WASLO00401 505 aaPredicted RBP19.1■□□□□ 0.65
H3F3B-213ENST00000593254 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
H3F3B-213ENST00000593254 ITSN1Q15811 1721 aa19.09■□□□□ 0.65
H3F3B-213ENST00000593254 PHRF1Q9P1Y6 1649 aaKnown RBP19.09■□□□□ 0.65
H3F3B-213ENST00000593254 APBA3O96018 575 aa19.08■□□□□ 0.64
H3F3B-213ENST00000593254 YY1P25490 414 aa19.08■□□□□ 0.64
H3F3B-213ENST00000593254 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
H3F3B-213ENST00000593254 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
H3F3B-213ENST00000593254 ATP7BP35670 1465 aa19.06■□□□□ 0.64
H3F3B-213ENST00000593254 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
H3F3B-213ENST00000593254 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
H3F3B-213ENST00000593254 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
H3F3B-213ENST00000593254 BARGINQ6ZT62 677 aa19.05■□□□□ 0.64
H3F3B-213ENST00000593254 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
H3F3B-213ENST00000593254 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
H3F3B-213ENST00000593254 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
H3F3B-213ENST00000593254 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
H3F3B-213ENST00000593254 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
H3F3B-213ENST00000593254 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
H3F3B-213ENST00000593254 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
H3F3B-213ENST00000593254 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
H3F3B-213ENST00000593254 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
H3F3B-213ENST00000593254 NBPF14Q5TI25 921 aa19.01■□□□□ 0.63
H3F3B-213ENST00000593254 LMO7Q8WWI1 1683 aa19.01■□□□□ 0.63
H3F3B-213ENST00000593254 NUDT16Q96DE0 195 aaKnown RBP19■□□□□ 0.63
H3F3B-213ENST00000593254 CDK19Q9BWU1 502 aa19■□□□□ 0.63
H3F3B-213ENST00000593254 USP35Q9P2H5 1018 aa19■□□□□ 0.63
H3F3B-213ENST00000593254 QRICH2Q9H0J4 1663 aa19■□□□□ 0.63
H3F3B-213ENST00000593254 CAMTA1Q9Y6Y1 1673 aa19■□□□□ 0.63
H3F3B-213ENST00000593254 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
H3F3B-213ENST00000593254 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
H3F3B-213ENST00000593254 SPON1Q9HCB6 807 aa18.99■□□□□ 0.63
H3F3B-213ENST00000593254 PARP4Q9UKK3 1724 aaKnown RBP18.98■□□□□ 0.63
H3F3B-213ENST00000593254 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
H3F3B-213ENST00000593254 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
H3F3B-213ENST00000593254 POLR3AO14802 1390 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-213ENST00000593254 RGPD3A6NKT7 1758 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-213ENST00000593254 RGPD4Q7Z3J3 1758 aa18.97■□□□□ 0.63
H3F3B-213ENST00000593254 KCNQ2O43526 872 aa18.97■□□□□ 0.63
H3F3B-213ENST00000593254 LARP1Q6PKG0 1096 aaKnown RBP18.97■□□□□ 0.63
H3F3B-213ENST00000593254 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
H3F3B-213ENST00000593254 CPDO75976 1380 aa18.96■□□□□ 0.63
H3F3B-213ENST00000593254 EVA1CP58658 441 aa18.96■□□□□ 0.63
H3F3B-213ENST00000593254 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
H3F3B-213ENST00000593254 PEAK1Q9H792 1746 aa18.95■□□□□ 0.62
H3F3B-213ENST00000593254 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-213ENST00000593254 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
H3F3B-213ENST00000593254 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
H3F3B-213ENST00000593254 SBF2Q86WG5 1849 aa18.94■□□□□ 0.62
H3F3B-213ENST00000593254 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
H3F3B-213ENST00000593254 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
H3F3B-213ENST00000593254 USP19O94966 1318 aa18.93■□□□□ 0.62
H3F3B-213ENST00000593254 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
H3F3B-213ENST00000593254 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
H3F3B-213ENST00000593254 ACEP12821 1306 aa18.92■□□□□ 0.62
H3F3B-213ENST00000593254 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
H3F3B-213ENST00000593254 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
H3F3B-213ENST00000593254 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
H3F3B-213ENST00000593254 PLSCR1O15162 318 aa18.9■□□□□ 0.62
H3F3B-213ENST00000593254 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
H3F3B-213ENST00000593254 OVOS2A0A0G2JMS6 1433 aa18.9■□□□□ 0.62
H3F3B-213ENST00000593254 OVOS2A0A0J9YW53 1432 aa18.9■□□□□ 0.62
H3F3B-213ENST00000593254 OVOS2Q6IE36 1432 aa18.9■□□□□ 0.62
H3F3B-213ENST00000593254 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
H3F3B-213ENST00000593254 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
H3F3B-213ENST00000593254 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
H3F3B-213ENST00000593254 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
H3F3B-213ENST00000593254 LRRC37A3O60309 1634 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms