RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.28
DDX39A-219ENST00000592927 SPON1Q9HCB6 807 aa16.77■□□□□ 0.28
DDX39A-219ENST00000592927 POGKQ9P215 609 aa16.76■□□□□ 0.27
DDX39A-219ENST00000592927 GPRASP1Q5JY77 1395 aa16.76■□□□□ 0.27
DDX39A-219ENST00000592927 KCNQ2O43526 872 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 TRIM37O94972 964 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 APBA3O96018 575 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
DDX39A-219ENST00000592927 NBPF14Q5TI25 921 aa16.74■□□□□ 0.27
DDX39A-219ENST00000592927 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
DDX39A-219ENST00000592927 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
DDX39A-219ENST00000592927 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-219ENST00000592927 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX39A-219ENST00000592927 LMOD2Q6P5Q4 547 aa16.72■□□□□ 0.27
DDX39A-219ENST00000592927 BTG4Q9NY30 223 aa16.72■□□□□ 0.27
DDX39A-219ENST00000592927 PLEKHH1Q9ULM0 1364 aa16.72■□□□□ 0.27
DDX39A-219ENST00000592927 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
DDX39A-219ENST00000592927 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
DDX39A-219ENST00000592927 PLCH1Q4KWH8 1693 aa16.7■□□□□ 0.26
DDX39A-219ENST00000592927 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
DDX39A-219ENST00000592927 PSME1Q06323 249 aa16.7■□□□□ 0.26
DDX39A-219ENST00000592927 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
DDX39A-219ENST00000592927 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-219ENST00000592927 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
DDX39A-219ENST00000592927 TNS3Q68CZ2 1445 aa16.69■□□□□ 0.26
DDX39A-219ENST00000592927 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
DDX39A-219ENST00000592927 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
DDX39A-219ENST00000592927 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
DDX39A-219ENST00000592927 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
DDX39A-219ENST00000592927 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-219ENST00000592927 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
DDX39A-219ENST00000592927 USP47Q96K76 1375 aa16.65■□□□□ 0.26
DDX39A-219ENST00000592927 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-219ENST00000592927 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
DDX39A-219ENST00000592927 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
DDX39A-219ENST00000592927 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
DDX39A-219ENST00000592927 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
DDX39A-219ENST00000592927 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
DDX39A-219ENST00000592927 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX39A-219ENST00000592927 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-219ENST00000592927 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
DDX39A-219ENST00000592927 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
DDX39A-219ENST00000592927 KIF1AQ12756 1690 aa16.59■□□□□ 0.25
DDX39A-219ENST00000592927 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
DDX39A-219ENST00000592927 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
DDX39A-219ENST00000592927 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
DDX39A-219ENST00000592927 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
DDX39A-219ENST00000592927 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
DDX39A-219ENST00000592927 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
DDX39A-219ENST00000592927 UTRNP46939 3433 aa16.58■□□□□ 0.24
DDX39A-219ENST00000592927 SPATA31A1Q5TZJ5 1347 aa16.57■□□□□ 0.24
DDX39A-219ENST00000592927 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
DDX39A-219ENST00000592927 RREB1Q92766 1687 aa16.56■□□□□ 0.24
DDX39A-219ENST00000592927 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
DDX39A-219ENST00000592927 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
DDX39A-219ENST00000592927 TESK2Q96S53 571 aa16.56■□□□□ 0.24
DDX39A-219ENST00000592927 GIGYF1O75420 1035 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-219ENST00000592927 ZBTB7AO95365 584 aa16.55■□□□□ 0.24
DDX39A-219ENST00000592927 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
DDX39A-219ENST00000592927 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-219ENST00000592927 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
DDX39A-219ENST00000592927 PMFBP1Q8TBY8 1022 aa16.54■□□□□ 0.24
DDX39A-219ENST00000592927 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 PTGER2P43116 358 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 TMF1P82094 1093 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
DDX39A-219ENST00000592927 FHDC1Q9C0D6 1143 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-219ENST00000592927 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-219ENST00000592927 COL14A1Q05707 1796 aaKnown RBP16.53■□□□□ 0.24
DDX39A-219ENST00000592927 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
DDX39A-219ENST00000592927 NRKQ7Z2Y5 1582 aa16.52■□□□□ 0.24
DDX39A-219ENST00000592927 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
DDX39A-219ENST00000592927 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
DDX39A-219ENST00000592927 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-219ENST00000592927 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
DDX39A-219ENST00000592927 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
DDX39A-219ENST00000592927 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
DDX39A-219ENST00000592927 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
DDX39A-219ENST00000592927 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
DDX39A-219ENST00000592927 ATP7BP35670 1465 aa16.48■□□□□ 0.23
DDX39A-219ENST00000592927 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
DDX39A-219ENST00000592927 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
DDX39A-219ENST00000592927 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-219ENST00000592927 PLSCR1O15162 318 aa16.45■□□□□ 0.22
DDX39A-219ENST00000592927 EVA1CP58658 441 aa16.45■□□□□ 0.22
DDX39A-219ENST00000592927 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
DDX39A-219ENST00000592927 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
DDX39A-219ENST00000592927 MYOM1P52179 1685 aa16.45■□□□□ 0.22
DDX39A-219ENST00000592927 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
DDX39A-219ENST00000592927 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
DDX39A-219ENST00000592927 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
DDX39A-219ENST00000592927 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
DDX39A-219ENST00000592927 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms