RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CABLES1Q8TDN4 633 aa7.58□□□□□ -1.2
VAPA-208ENST00000584796 SENP2Q9HC62 589 aa7.58□□□□□ -1.2
VAPA-208ENST00000584796 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
VAPA-208ENST00000584796 SNRPBP14678 240 aaKnown RBP7.57□□□□□ -1.2
VAPA-208ENST00000584796 VARSP26640 1264 aaKnown RBP7.57□□□□□ -1.2
VAPA-208ENST00000584796 TLL2Q9Y6L7 1015 aa7.57□□□□□ -1.2
VAPA-208ENST00000584796 WASF2Q9Y6W5 498 aa7.57□□□□□ -1.2
VAPA-208ENST00000584796 CTHP32929 405 aa7.56□□□□□ -1.2
VAPA-208ENST00000584796 MAP10Q9P2G4 905 aa7.56□□□□□ -1.2
VAPA-208ENST00000584796 LILRB3O75022 631 aa7.55□□□□□ -1.2
VAPA-208ENST00000584796 QPCTQ16769 361 aa7.55□□□□□ -1.2
VAPA-208ENST00000584796 CSPP1Q1MSJ5 1256 aa7.55□□□□□ -1.2
VAPA-208ENST00000584796 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
VAPA-208ENST00000584796 PER1O15534 1290 aaPredicted RBP7.54□□□□□ -1.2
VAPA-208ENST00000584796 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
VAPA-208ENST00000584796 PLEKHG3A1L390 1219 aa7.53□□□□□ -1.2
VAPA-208ENST00000584796 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
VAPA-208ENST00000584796 WFS1O76024 890 aa7.53□□□□□ -1.2
VAPA-208ENST00000584796 CLK2P49760 499 aaKnown RBP7.52□□□□□ -1.21
VAPA-208ENST00000584796 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
VAPA-208ENST00000584796 NUTM2BA6NNL0 878 aaPredicted RBP7.51□□□□□ -1.21
VAPA-208ENST00000584796 NUTM2EB1AL46 878 aaPredicted RBP7.51□□□□□ -1.21
VAPA-208ENST00000584796 BMP1P13497 986 aa7.51□□□□□ -1.21
VAPA-208ENST00000584796 NNTQ13423 1086 aa7.51□□□□□ -1.21
VAPA-208ENST00000584796 NUTM2DQ5VT03 806 aaPredicted RBP7.51□□□□□ -1.21
VAPA-208ENST00000584796 NUTM2AQ8IVF1 878 aaPredicted RBP7.51□□□□□ -1.21
VAPA-208ENST00000584796 FAM174AQ8TBP5 190 aa7.51□□□□□ -1.21
VAPA-208ENST00000584796 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
VAPA-208ENST00000584796 CDK15Q96Q40 435 aa7.51□□□□□ -1.21
VAPA-208ENST00000584796 ADH1CP00326 375 aa7.5□□□□□ -1.21
VAPA-208ENST00000584796 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
VAPA-208ENST00000584796 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
VAPA-208ENST00000584796 RSPH6AQ9H0K4 717 aa7.5□□□□□ -1.21
VAPA-208ENST00000584796 TERTO14746 1132 aaKnown RBP7.49□□□□□ -1.21
VAPA-208ENST00000584796 HELBQ8NG08 1087 aaPredicted RBP7.49□□□□□ -1.21
VAPA-208ENST00000584796 TSC1Q92574 1164 aa7.49□□□□□ -1.21
VAPA-208ENST00000584796 WIPF1O43516 503 aa7.48□□□□□ -1.21
VAPA-208ENST00000584796 TIMP2P16035 220 aa7.48□□□□□ -1.21
VAPA-208ENST00000584796 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
VAPA-208ENST00000584796 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
VAPA-208ENST00000584796 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
VAPA-208ENST00000584796 BPHLQ86WA6 291 aaPredicted RBP7.47□□□□□ -1.21
VAPA-208ENST00000584796 ARMC2Q8NEN0 867 aa7.47□□□□□ -1.21
VAPA-208ENST00000584796 C1QTNF2Q9BXJ5 285 aa7.47□□□□□ -1.21
VAPA-208ENST00000584796 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
VAPA-208ENST00000584796 WDR4P57081 412 aaKnown RBP7.46□□□□□ -1.22
VAPA-208ENST00000584796 GRM5P41594 1212 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 NR5A1Q13285 461 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 AGERQ15109 404 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 NBPF14Q5TI25 921 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 SH3BP5LQ7L8J4 393 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 ZFP42Q96MM3 310 aa7.45□□□□□ -1.22
VAPA-208ENST00000584796 NR3C2P08235 984 aa7.44□□□□□ -1.22
VAPA-208ENST00000584796 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
VAPA-208ENST00000584796 SH3D19Q5HYK7 790 aa7.44□□□□□ -1.22
VAPA-208ENST00000584796 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
VAPA-208ENST00000584796 KDM4CQ9H3R0 1056 aa7.44□□□□□ -1.22
VAPA-208ENST00000584796 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
VAPA-208ENST00000584796 NPAS3Q8IXF0 933 aa7.43□□□□□ -1.22
VAPA-208ENST00000584796 TRMT44Q8IYL2 757 aaKnown RBP7.43□□□□□ -1.22
VAPA-208ENST00000584796 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.221e-7■■□□□ 14.2
VAPA-208ENST00000584796 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.43□□□□□ -1.22
VAPA-208ENST00000584796 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
VAPA-208ENST00000584796 NXF1Q9UBU9 619 aaKnown RBP7.43□□□□□ -1.22
VAPA-208ENST00000584796 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
VAPA-208ENST00000584796 CTDSPL2Q05D32 466 aa7.42□□□□□ -1.22
VAPA-208ENST00000584796 FBXO31Q5XUX0 539 aaPredicted RBP7.42□□□□□ -1.22
VAPA-208ENST00000584796 ITPKCQ96DU7 683 aa7.42□□□□□ -1.22
VAPA-208ENST00000584796 BCANQ96GW7 911 aa7.42□□□□□ -1.22
VAPA-208ENST00000584796 DDRGK1Q96HY6 314 aa7.42□□□□□ -1.22
VAPA-208ENST00000584796 ZIC2O95409 532 aaPredicted RBP7.41□□□□□ -1.22
VAPA-208ENST00000584796 SCARF1Q14162 830 aa7.41□□□□□ -1.22
VAPA-208ENST00000584796 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
VAPA-208ENST00000584796 FAM117AQ9C073 453 aa7.41□□□□□ -1.22
VAPA-208ENST00000584796 ZFAND3Q9H8U3 227 aa7.41□□□□□ -1.22
VAPA-208ENST00000584796 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
VAPA-208ENST00000584796 H3BM21 787 aa7.39□□□□□ -1.23
VAPA-208ENST00000584796 FSHRP23945 695 aa7.39□□□□□ -1.23
VAPA-208ENST00000584796 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
VAPA-208ENST00000584796 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
VAPA-208ENST00000584796 SLC16A10Q8TF71 515 aa7.39□□□□□ -1.23
VAPA-208ENST00000584796 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
VAPA-208ENST00000584796 MAGEB6P1A0A0J9YX57 407 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 ERFEQ4G0M1 354 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 VASH1Q7L8A9 365 aaPredicted RBP7.38□□□□□ -1.23
VAPA-208ENST00000584796 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 STK17AQ9UEE5 414 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 FKBPLQ9UIM3 349 aa7.38□□□□□ -1.23
VAPA-208ENST00000584796 ZC3H4Q9UPT8 1303 aaKnown RBP7.37□□□□□ -1.23
VAPA-208ENST00000584796 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
VAPA-208ENST00000584796 IRF7Q92985 503 aa7.36□□□□□ -1.23
VAPA-208ENST00000584796 VEGFBP49765 207 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 NR6A1Q15406 480 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 ARHGAP9Q9BRR9 750 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 EMILIN1Q9Y6C2 1016 aa7.35□□□□□ -1.23
VAPA-208ENST00000584796 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
VAPA-208ENST00000584796 SOBPA7XYQ1 873 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms