RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
SRSF1-207ENST00000584668 R3HDM1Q15032 1099 aaKnown RBP12.54□□□□□ -0.4
SRSF1-207ENST00000584668 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
SRSF1-207ENST00000584668 SPATA31A5Q5VU36 1347 aa12.54□□□□□ -0.4
SRSF1-207ENST00000584668 SPATA31A7Q8IWB4 1347 aa12.54□□□□□ -0.4
SRSF1-207ENST00000584668 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRSF1-207ENST00000584668 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
SRSF1-207ENST00000584668 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
SRSF1-207ENST00000584668 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.4
SRSF1-207ENST00000584668 RREB1Q92766 1687 aa12.52□□□□□ -0.4
SRSF1-207ENST00000584668 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
SRSF1-207ENST00000584668 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
SRSF1-207ENST00000584668 ATP7BP35670 1465 aa12.52□□□□□ -0.41
SRSF1-207ENST00000584668 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
SRSF1-207ENST00000584668 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
SRSF1-207ENST00000584668 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
SRSF1-207ENST00000584668 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
SRSF1-207ENST00000584668 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
SRSF1-207ENST00000584668 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
SRSF1-207ENST00000584668 YY1P25490 414 aa12.49□□□□□ -0.41
SRSF1-207ENST00000584668 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
SRSF1-207ENST00000584668 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
SRSF1-207ENST00000584668 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
SRSF1-207ENST00000584668 APBA3O96018 575 aa12.48□□□□□ -0.41
SRSF1-207ENST00000584668 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
SRSF1-207ENST00000584668 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
SRSF1-207ENST00000584668 TRIM37O94972 964 aa12.47□□□□□ -0.41
SRSF1-207ENST00000584668 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
SRSF1-207ENST00000584668 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
SRSF1-207ENST00000584668 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.41
SRSF1-207ENST00000584668 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.41
SRSF1-207ENST00000584668 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
SRSF1-207ENST00000584668 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
SRSF1-207ENST00000584668 EVA1CP58658 441 aa12.46□□□□□ -0.41
SRSF1-207ENST00000584668 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
SRSF1-207ENST00000584668 STRN4Q9NRL3 753 aa12.46□□□□□ -0.41
SRSF1-207ENST00000584668 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
SRSF1-207ENST00000584668 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
SRSF1-207ENST00000584668 CAMKK2Q96RR4 588 aa12.45□□□□□ -0.42
SRSF1-207ENST00000584668 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
SRSF1-207ENST00000584668 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
SRSF1-207ENST00000584668 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
SRSF1-207ENST00000584668 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
SRSF1-207ENST00000584668 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
SRSF1-207ENST00000584668 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
SRSF1-207ENST00000584668 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
SRSF1-207ENST00000584668 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
SRSF1-207ENST00000584668 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
SRSF1-207ENST00000584668 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
SRSF1-207ENST00000584668 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
SRSF1-207ENST00000584668 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
SRSF1-207ENST00000584668 TCP11L2Q8N4U5 519 aa12.41□□□□□ -0.42
SRSF1-207ENST00000584668 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
SRSF1-207ENST00000584668 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.42
SRSF1-207ENST00000584668 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.42
SRSF1-207ENST00000584668 ZC3H6P61129 1189 aaKnown RBP12.4□□□□□ -0.42
SRSF1-207ENST00000584668 CHRNA2Q15822 529 aa12.4□□□□□ -0.42
SRSF1-207ENST00000584668 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
SRSF1-207ENST00000584668 KCNQ2O43526 872 aa12.39□□□□□ -0.43
SRSF1-207ENST00000584668 CPDO75976 1380 aa12.39□□□□□ -0.43
SRSF1-207ENST00000584668 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
SRSF1-207ENST00000584668 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
SRSF1-207ENST00000584668 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
SRSF1-207ENST00000584668 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
SRSF1-207ENST00000584668 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
SRSF1-207ENST00000584668 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
SRSF1-207ENST00000584668 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
SRSF1-207ENST00000584668 CRB1P82279 1406 aa12.37□□□□□ -0.43
SRSF1-207ENST00000584668 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
SRSF1-207ENST00000584668 COL5A2P05997 1499 aaPredicted RBP12.36□□□□□ -0.43
SRSF1-207ENST00000584668 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
SRSF1-207ENST00000584668 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
SRSF1-207ENST00000584668 BRD4O60885 1362 aaPredicted RBP12.35□□□□□ -0.43
SRSF1-207ENST00000584668 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
SRSF1-207ENST00000584668 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 ACEP12821 1306 aa12.35□□□□□ -0.43
SRSF1-207ENST00000584668 PEAK1Q9H792 1746 aa12.34□□□□□ -0.43
SRSF1-207ENST00000584668 UTRNP46939 3433 aa12.34□□□□□ -0.43
SRSF1-207ENST00000584668 USP19O94966 1318 aa12.34□□□□□ -0.43
SRSF1-207ENST00000584668 CHD4Q14839 1912 aa12.33□□□□□ -0.44
SRSF1-207ENST00000584668 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.44
SRSF1-207ENST00000584668 PLSCR1O15162 318 aa12.33□□□□□ -0.44
SRSF1-207ENST00000584668 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
SRSF1-207ENST00000584668 DDB1Q16531 1140 aa12.32□□□□□ -0.44
SRSF1-207ENST00000584668 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
SRSF1-207ENST00000584668 MYOM1P52179 1685 aa12.32□□□□□ -0.44
SRSF1-207ENST00000584668 PPIP5K1Q6PFW1 1433 aa12.31□□□□□ -0.44
SRSF1-207ENST00000584668 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
SRSF1-207ENST00000584668 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
SRSF1-207ENST00000584668 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
SRSF1-207ENST00000584668 ZBTB7CA1YPR0 619 aa12.3□□□□□ -0.44
SRSF1-207ENST00000584668 GCP02774 474 aa12.3□□□□□ -0.44
SRSF1-207ENST00000584668 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
SRSF1-207ENST00000584668 SLIT3O75094 1523 aa12.29□□□□□ -0.44
SRSF1-207ENST00000584668 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
SRSF1-207ENST00000584668 STK32BQ9NY57 414 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms