RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AVPP01185 164 aa10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 CABLES1Q8TDN4 633 aa10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 BAP1Q92560 729 aa10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
SMCHD1-205ENST00000581383 AGERQ15109 404 aa10.06□□□□□ -0.8
SMCHD1-205ENST00000581383 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
SMCHD1-205ENST00000581383 CRIPAKQ8N1N5 446 aa10.05□□□□□ -0.8
SMCHD1-205ENST00000581383 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
SMCHD1-205ENST00000581383 SH3BP2P78314 561 aa10.04□□□□□ -0.8
SMCHD1-205ENST00000581383 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
SMCHD1-205ENST00000581383 HPS1Q92902 700 aa10.04□□□□□ -0.8
SMCHD1-205ENST00000581383 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
SMCHD1-205ENST00000581383 CFAP99D6REC4 459 aa10.03□□□□□ -0.8
SMCHD1-205ENST00000581383 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
SMCHD1-205ENST00000581383 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
SMCHD1-205ENST00000581383 GMPR2Q9P2T1 348 aaKnown RBP10.03□□□□□ -0.8
SMCHD1-205ENST00000581383 PLEKHG3A1L390 1219 aa10.02□□□□□ -0.81
SMCHD1-205ENST00000581383 NEUROD2Q15784 382 aa10.02□□□□□ -0.81
SMCHD1-205ENST00000581383 LYPD8Q6UX82 237 aa10.02□□□□□ -0.81
SMCHD1-205ENST00000581383 ZNF511Q8NB15 262 aa10.02□□□□□ -0.81
SMCHD1-205ENST00000581383 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
SMCHD1-205ENST00000581383 SMCPP49901 116 aaPredicted RBP10.01□□□□□ -0.81
SMCHD1-205ENST00000581383 ARID5BQ14865 1188 aa10.01□□□□□ -0.81
SMCHD1-205ENST00000581383 LIMD1Q9UGP4 676 aa10.01□□□□□ -0.81
SMCHD1-205ENST00000581383 SENP2Q9HC62 589 aa10□□□□□ -0.81
SMCHD1-205ENST00000581383 MAP10Q9P2G4 905 aa10□□□□□ -0.81
SMCHD1-205ENST00000581383 VARSP26640 1264 aaKnown RBP9.99□□□□□ -0.81
SMCHD1-205ENST00000581383 QPCTQ16769 361 aa9.99□□□□□ -0.81
SMCHD1-205ENST00000581383 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
SMCHD1-205ENST00000581383 FAM174AQ8TBP5 190 aa9.98□□□□□ -0.81
SMCHD1-205ENST00000581383 CAPN5O15484 640 aaPredicted RBP9.97□□□□□ -0.81
SMCHD1-205ENST00000581383 TLL2Q9Y6L7 1015 aa9.97□□□□□ -0.81
SMCHD1-205ENST00000581383 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
SMCHD1-205ENST00000581383 FAM181BA6NEQ2 426 aa9.95□□□□□ -0.82
SMCHD1-205ENST00000581383 SIAH2O43255 324 aa9.95□□□□□ -0.82
SMCHD1-205ENST00000581383 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
SMCHD1-205ENST00000581383 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 LILRB3O75022 631 aa9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 KDM4CQ9H3R0 1056 aa9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
SMCHD1-205ENST00000581383 SUZ12Q15022 739 aaKnown RBP9.93□□□□□ -0.82
SMCHD1-205ENST00000581383 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
SMCHD1-205ENST00000581383 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
SMCHD1-205ENST00000581383 BPHLQ86WA6 291 aaPredicted RBP9.93□□□□□ -0.82
SMCHD1-205ENST00000581383 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
SMCHD1-205ENST00000581383 NNTQ13423 1086 aa9.92□□□□□ -0.82
SMCHD1-205ENST00000581383 NBPF14Q5TI25 921 aa9.92□□□□□ -0.82
SMCHD1-205ENST00000581383 F12P00748 615 aaPredicted RBP9.91□□□□□ -0.82
SMCHD1-205ENST00000581383 MAGEB6P1A0A0J9YX57 407 aa9.9□□□□□ -0.82
SMCHD1-205ENST00000581383 TERTO14746 1132 aaKnown RBP9.9□□□□□ -0.82
SMCHD1-205ENST00000581383 BMP1P13497 986 aa9.89□□□□□ -0.83
SMCHD1-205ENST00000581383 SNRPBP14678 240 aaKnown RBP9.89□□□□□ -0.83
SMCHD1-205ENST00000581383 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
SMCHD1-205ENST00000581383 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
SMCHD1-205ENST00000581383 WDR4P57081 412 aaKnown RBP9.88□□□□□ -0.83
SMCHD1-205ENST00000581383 SCARF1Q14162 830 aa9.88□□□□□ -0.83
SMCHD1-205ENST00000581383 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
SMCHD1-205ENST00000581383 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
SMCHD1-205ENST00000581383 ADH1CP00326 375 aa9.87□□□□□ -0.83
SMCHD1-205ENST00000581383 CTDSPL2Q05D32 466 aa9.87□□□□□ -0.83
SMCHD1-205ENST00000581383 AP1G2O75843 785 aa9.86□□□□□ -0.83
SMCHD1-205ENST00000581383 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
SMCHD1-205ENST00000581383 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
SMCHD1-205ENST00000581383 MPNDQ8N594 471 aa9.85□□□□□ -0.83
SMCHD1-205ENST00000581383 UPP2O95045 317 aa9.84□□□□□ -0.83
SMCHD1-205ENST00000581383 NR5A1Q13285 461 aa9.84□□□□□ -0.83
SMCHD1-205ENST00000581383 PROCA1Q8NCQ7 364 aaPredicted RBP9.84□□□□□ -0.83
SMCHD1-205ENST00000581383 PNMA1Q8ND90 353 aa9.84□□□□□ -0.83
SMCHD1-205ENST00000581383 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
SMCHD1-205ENST00000581383 SLC16A10Q8TF71 515 aa9.83□□□□□ -0.84
SMCHD1-205ENST00000581383 ZIC2O95409 532 aaPredicted RBP9.82□□□□□ -0.84
SMCHD1-205ENST00000581383 ZBTB33Q86T24 672 aa9.82□□□□□ -0.84
SMCHD1-205ENST00000581383 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
SMCHD1-205ENST00000581383 ARHGAP9Q9BRR9 750 aa9.82□□□□□ -0.84
SMCHD1-205ENST00000581383 FSHRP23945 695 aa9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 MRPL14Q6P1L8 145 aaKnown RBP9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 TRIM46Q7Z4K8 759 aa9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 LRRN4Q8WUT4 740 aa9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 GPKOWQ92917 476 aaPredicted RBP eCLIP9.81□□□□□ -0.842e-12■■□□□ 11.4
SMCHD1-205ENST00000581383 ZFP42Q96MM3 310 aa9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
SMCHD1-205ENST00000581383 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
SMCHD1-205ENST00000581383 TIMP2P16035 220 aa9.79□□□□□ -0.84
SMCHD1-205ENST00000581383 NR6A1Q15406 480 aa9.79□□□□□ -0.84
SMCHD1-205ENST00000581383 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
SMCHD1-205ENST00000581383 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
SMCHD1-205ENST00000581383 FKBPLQ9UIM3 349 aa9.79□□□□□ -0.84
SMCHD1-205ENST00000581383 ZSCAN1Q8NBB4 408 aa9.78□□□□□ -0.84
SMCHD1-205ENST00000581383 SLC10A4Q96EP9 437 aa9.78□□□□□ -0.84
SMCHD1-205ENST00000581383 BMP2P12643 396 aa9.77□□□□□ -0.85
SMCHD1-205ENST00000581383 ITPKCQ96DU7 683 aa9.77□□□□□ -0.85
SMCHD1-205ENST00000581383 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
SMCHD1-205ENST00000581383 LORP23490 312 aaPredicted RBP9.76□□□□□ -0.85
SMCHD1-205ENST00000581383 PTK2Q05397 1052 aa9.76□□□□□ -0.85
SMCHD1-205ENST00000581383 PDXDC2PQ6P474 469 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 520.8 ms