RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ADRA2BP18089 450 aa17.7■□□□□ 0.42
CTNS-208ENST00000574218 THSD7AQ9UPZ6 1657 aa17.7■□□□□ 0.42
CTNS-208ENST00000574218 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
CTNS-208ENST00000574218 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
CTNS-208ENST00000574218 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
CTNS-208ENST00000574218 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
CTNS-208ENST00000574218 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
CTNS-208ENST00000574218 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
CTNS-208ENST00000574218 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
CTNS-208ENST00000574218 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
CTNS-208ENST00000574218 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
CTNS-208ENST00000574218 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
CTNS-208ENST00000574218 TULP4Q9NRJ4 1543 aa17.66■□□□□ 0.42
CTNS-208ENST00000574218 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
CTNS-208ENST00000574218 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
CTNS-208ENST00000574218 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
CTNS-208ENST00000574218 MINK1Q8N4C8 1332 aaPredicted RBP17.64■□□□□ 0.41
CTNS-208ENST00000574218 PHRF1Q9P1Y6 1649 aaKnown RBP17.64■□□□□ 0.41
CTNS-208ENST00000574218 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
CTNS-208ENST00000574218 PARD3Q8TEW0 1356 aa17.63■□□□□ 0.41
CTNS-208ENST00000574218 TRIM37O94972 964 aa17.62■□□□□ 0.41
CTNS-208ENST00000574218 RREB1Q92766 1687 aa17.61■□□□□ 0.41
CTNS-208ENST00000574218 APBA3O96018 575 aa17.61■□□□□ 0.41
CTNS-208ENST00000574218 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
CTNS-208ENST00000574218 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
CTNS-208ENST00000574218 WASLO00401 505 aaPredicted RBP17.6■□□□□ 0.41
CTNS-208ENST00000574218 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
CTNS-208ENST00000574218 NUP188Q5SRE5 1749 aa17.6■□□□□ 0.41
CTNS-208ENST00000574218 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 NBPF8Q3BBV2 869 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 NBPF14Q5TI25 921 aa17.59■□□□□ 0.41
CTNS-208ENST00000574218 ATP7BP35670 1465 aa17.58■□□□□ 0.41
CTNS-208ENST00000574218 MSH5O43196 834 aa17.58■□□□□ 0.4
CTNS-208ENST00000574218 EVA1CP58658 441 aa17.58■□□□□ 0.4
CTNS-208ENST00000574218 CAMKK2Q96RR4 588 aa17.58■□□□□ 0.4
CTNS-208ENST00000574218 YY1P25490 414 aa17.57■□□□□ 0.4
CTNS-208ENST00000574218 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
CTNS-208ENST00000574218 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
CTNS-208ENST00000574218 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
CTNS-208ENST00000574218 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
CTNS-208ENST00000574218 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
CTNS-208ENST00000574218 KDM2AQ9Y2K7 1162 aa17.54■□□□□ 0.4
CTNS-208ENST00000574218 NUTM2GQ5VZR2 741 aa17.52■□□□□ 0.4
CTNS-208ENST00000574218 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
CTNS-208ENST00000574218 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
CTNS-208ENST00000574218 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
CTNS-208ENST00000574218 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
CTNS-208ENST00000574218 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
CTNS-208ENST00000574218 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
CTNS-208ENST00000574218 NRKQ7Z2Y5 1582 aa17.5■□□□□ 0.39
CTNS-208ENST00000574218 TOPAZ1Q8N9V7 1692 aa17.5■□□□□ 0.39
CTNS-208ENST00000574218 C11orf95C9JLR9 678 aaPredicted RBP17.49■□□□□ 0.39
CTNS-208ENST00000574218 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
CTNS-208ENST00000574218 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
CTNS-208ENST00000574218 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
CTNS-208ENST00000574218 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
CTNS-208ENST00000574218 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
CTNS-208ENST00000574218 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
CTNS-208ENST00000574218 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
CTNS-208ENST00000574218 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
CTNS-208ENST00000574218 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
CTNS-208ENST00000574218 ACEP12821 1306 aa17.47■□□□□ 0.39
CTNS-208ENST00000574218 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
CTNS-208ENST00000574218 KCNQ2O43526 872 aa17.46■□□□□ 0.39
CTNS-208ENST00000574218 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
CTNS-208ENST00000574218 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
CTNS-208ENST00000574218 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
CTNS-208ENST00000574218 CPDO75976 1380 aa17.44■□□□□ 0.38
CTNS-208ENST00000574218 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
CTNS-208ENST00000574218 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
CTNS-208ENST00000574218 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
CTNS-208ENST00000574218 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
CTNS-208ENST00000574218 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
CTNS-208ENST00000574218 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
CTNS-208ENST00000574218 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
CTNS-208ENST00000574218 ZBTB7CA1YPR0 619 aa17.42■□□□□ 0.38
CTNS-208ENST00000574218 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
CTNS-208ENST00000574218 WNK3Q9BYP7 1800 aa17.41■□□□□ 0.38
CTNS-208ENST00000574218 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
CTNS-208ENST00000574218 CRB1P82279 1406 aa17.4■□□□□ 0.38
CTNS-208ENST00000574218 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
CTNS-208ENST00000574218 USP19O94966 1318 aa17.4■□□□□ 0.38
CTNS-208ENST00000574218 LRRC37A3O60309 1634 aa17.39■□□□□ 0.38
CTNS-208ENST00000574218 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
CTNS-208ENST00000574218 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
CTNS-208ENST00000574218 GCP02774 474 aa17.38■□□□□ 0.37
CTNS-208ENST00000574218 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
CTNS-208ENST00000574218 DDB1Q16531 1140 aa17.38■□□□□ 0.37
CTNS-208ENST00000574218 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
CTNS-208ENST00000574218 PLSCR1O15162 318 aa17.36■□□□□ 0.37
CTNS-208ENST00000574218 TOM1L2Q6ZVM7 507 aa17.36■□□□□ 0.37
CTNS-208ENST00000574218 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
CTNS-208ENST00000574218 CHD4Q14839 1912 aa17.36■□□□□ 0.37
CTNS-208ENST00000574218 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
CTNS-208ENST00000574218 MYOM1P52179 1685 aa17.35■□□□□ 0.37
CTNS-208ENST00000574218 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
CTNS-208ENST00000574218 RGPD5Q99666 1765 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms