RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 EZH2Q15910 746 aaKnown RBP16.87■□□□□ 0.29
CHMP6-202ENST00000571457 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
CHMP6-202ENST00000571457 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
CHMP6-202ENST00000571457 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
CHMP6-202ENST00000571457 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
CHMP6-202ENST00000571457 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
CHMP6-202ENST00000571457 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
CHMP6-202ENST00000571457 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
CHMP6-202ENST00000571457 CAMKK2Q96RR4 588 aa16.85■□□□□ 0.29
CHMP6-202ENST00000571457 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
CHMP6-202ENST00000571457 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
CHMP6-202ENST00000571457 TRIM37O94972 964 aa16.83■□□□□ 0.28
CHMP6-202ENST00000571457 YY1P25490 414 aa16.83■□□□□ 0.28
CHMP6-202ENST00000571457 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
CHMP6-202ENST00000571457 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
CHMP6-202ENST00000571457 APBA3O96018 575 aa16.82■□□□□ 0.28
CHMP6-202ENST00000571457 NBPF8Q3BBV2 869 aa16.81■□□□□ 0.28
CHMP6-202ENST00000571457 NBPF14Q5TI25 921 aa16.81■□□□□ 0.28
CHMP6-202ENST00000571457 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
CHMP6-202ENST00000571457 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
CHMP6-202ENST00000571457 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
CHMP6-202ENST00000571457 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
CHMP6-202ENST00000571457 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
CHMP6-202ENST00000571457 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
CHMP6-202ENST00000571457 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
CHMP6-202ENST00000571457 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
CHMP6-202ENST00000571457 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
CHMP6-202ENST00000571457 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
CHMP6-202ENST00000571457 CRYBG1Q9Y4K1 1723 aa16.77■□□□□ 0.28
CHMP6-202ENST00000571457 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.28
CHMP6-202ENST00000571457 EVA1CP58658 441 aa16.76■□□□□ 0.27
CHMP6-202ENST00000571457 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
CHMP6-202ENST00000571457 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
CHMP6-202ENST00000571457 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
CHMP6-202ENST00000571457 ADGRB1O14514 1584 aa16.76■□□□□ 0.27
CHMP6-202ENST00000571457 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
CHMP6-202ENST00000571457 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
CHMP6-202ENST00000571457 ATP7BP35670 1465 aa16.73■□□□□ 0.27
CHMP6-202ENST00000571457 RREB1Q92766 1687 aa16.73■□□□□ 0.27
CHMP6-202ENST00000571457 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
CHMP6-202ENST00000571457 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
CHMP6-202ENST00000571457 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
CHMP6-202ENST00000571457 KCNQ2O43526 872 aa16.72■□□□□ 0.27
CHMP6-202ENST00000571457 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
CHMP6-202ENST00000571457 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
CHMP6-202ENST00000571457 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
CHMP6-202ENST00000571457 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
CHMP6-202ENST00000571457 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
CHMP6-202ENST00000571457 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
CHMP6-202ENST00000571457 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
CHMP6-202ENST00000571457 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
CHMP6-202ENST00000571457 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
CHMP6-202ENST00000571457 CPDO75976 1380 aa16.67■□□□□ 0.26
CHMP6-202ENST00000571457 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
CHMP6-202ENST00000571457 DCAF11Q8TEB1 546 aa16.66■□□□□ 0.26
CHMP6-202ENST00000571457 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
CHMP6-202ENST00000571457 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
CHMP6-202ENST00000571457 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
CHMP6-202ENST00000571457 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
CHMP6-202ENST00000571457 ACEP12821 1306 aa16.65■□□□□ 0.26
CHMP6-202ENST00000571457 PLSCR1O15162 318 aa16.64■□□□□ 0.25
CHMP6-202ENST00000571457 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
CHMP6-202ENST00000571457 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
CHMP6-202ENST00000571457 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
CHMP6-202ENST00000571457 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
CHMP6-202ENST00000571457 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
CHMP6-202ENST00000571457 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
CHMP6-202ENST00000571457 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
CHMP6-202ENST00000571457 USP19O94966 1318 aa16.62■□□□□ 0.25
CHMP6-202ENST00000571457 LMO7Q8WWI1 1683 aa16.62■□□□□ 0.25
CHMP6-202ENST00000571457 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
CHMP6-202ENST00000571457 GCP02774 474 aa16.61■□□□□ 0.25
CHMP6-202ENST00000571457 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
CHMP6-202ENST00000571457 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
CHMP6-202ENST00000571457 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
CHMP6-202ENST00000571457 CRB1P82279 1406 aa16.6■□□□□ 0.25
CHMP6-202ENST00000571457 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
CHMP6-202ENST00000571457 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
CHMP6-202ENST00000571457 TOPAZ1Q8N9V7 1692 aa16.59■□□□□ 0.25
CHMP6-202ENST00000571457 DDB1Q16531 1140 aa16.58■□□□□ 0.24
CHMP6-202ENST00000571457 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
CHMP6-202ENST00000571457 UTRNP46939 3433 aa16.57■□□□□ 0.24
CHMP6-202ENST00000571457 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
CHMP6-202ENST00000571457 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
CHMP6-202ENST00000571457 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
CHMP6-202ENST00000571457 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
CHMP6-202ENST00000571457 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
CHMP6-202ENST00000571457 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
CHMP6-202ENST00000571457 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
CHMP6-202ENST00000571457 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
CHMP6-202ENST00000571457 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
CHMP6-202ENST00000571457 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
CHMP6-202ENST00000571457 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
CHMP6-202ENST00000571457 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
CHMP6-202ENST00000571457 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
CHMP6-202ENST00000571457 BCL9O00512 1426 aa16.53■□□□□ 0.24
CHMP6-202ENST00000571457 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
CHMP6-202ENST00000571457 PTGER2P43116 358 aa16.52■□□□□ 0.24
CHMP6-202ENST00000571457 NLRP6P59044 892 aa16.52■□□□□ 0.24
CHMP6-202ENST00000571457 LRRC37A3O60309 1634 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1487.7 ms