RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 RMI1Q9H9A7 625 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
CDH1-205ENST00000562836 ARPC5LQ9BPX5 153 aa11.44□□□□□ -0.58
CDH1-205ENST00000562836 FRMD4BQ9Y2L6 1034 aa11.44□□□□□ -0.58
CDH1-205ENST00000562836 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
CDH1-205ENST00000562836 KAT6BQ8WYB5 2073 aa11.44□□□□□ -0.58
CDH1-205ENST00000562836 KLHL23Q8NBE8 558 aa11.43□□□□□ -0.58
CDH1-205ENST00000562836 CXorf38Q8TB03 319 aa11.43□□□□□ -0.58
CDH1-205ENST00000562836 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
CDH1-205ENST00000562836 RPGRIP1LQ68CZ1 1315 aa11.43□□□□□ -0.58
CDH1-205ENST00000562836 PDCL2Q8N4E4 241 aa11.43□□□□□ -0.58
CDH1-205ENST00000562836 ZSCAN26Q16670 478 aa11.42□□□□□ -0.58
CDH1-205ENST00000562836 BECN1Q14457 450 aa11.42□□□□□ -0.58
CDH1-205ENST00000562836 JRKLQ9Y4A0 524 aa11.42□□□□□ -0.58
CDH1-205ENST00000562836 PAXBP1Q9Y5B6 917 aa11.42□□□□□ -0.58
CDH1-205ENST00000562836 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
CDH1-205ENST00000562836 GOPCQ9HD26 462 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
CDH1-205ENST00000562836 ERCC4Q92889 916 aaPredicted RBP11.41□□□□□ -0.58
CDH1-205ENST00000562836 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
CDH1-205ENST00000562836 TERF2Q15554 542 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 TRIM74Q86UV6 250 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 TRIM73Q86UV7 250 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 MYRIPQ8NFW9 859 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 ZNF396Q96N95 335 aaPredicted RBP11.4□□□□□ -0.58
CDH1-205ENST00000562836 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
CDH1-205ENST00000562836 SMAPO00193 183 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 MS4A1P11836 297 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 HNRNPH2P55795 449 aaKnown RBP11.39□□□□□ -0.59
CDH1-205ENST00000562836 SUGT1Q9Y2Z0 365 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 CD151P48509 253 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 E2F4Q16254 413 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 OGFRQ9NZT2 677 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
CDH1-205ENST00000562836 OATP04181 439 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 CASQ1P31415 396 aa11.39□□□□□ -0.59
CDH1-205ENST00000562836 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 NINLQ9Y2I6 1382 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 APBB1O00213 710 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
CDH1-205ENST00000562836 ATP6V1AP38606 617 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 GSCP56915 257 aaPredicted RBP11.38□□□□□ -0.59
CDH1-205ENST00000562836 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
CDH1-205ENST00000562836 C10orf67Q8IYJ2 551 aa11.38□□□□□ -0.59
CDH1-205ENST00000562836 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
CDH1-205ENST00000562836 ANKRD33BA6NCL7 494 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 ARL10Q8N8L6 244 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 KIF21BO75037 1637 aa11.37□□□□□ -0.59
CDH1-205ENST00000562836 PSMD2Q13200 908 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
CDH1-205ENST00000562836 THOC1Q96FV9 657 aaKnown RBP11.36□□□□□ -0.59
CDH1-205ENST00000562836 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 FEZ1Q99689 392 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 ARMC3Q5W041 872 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 PHC3Q8NDX5 983 aa11.36□□□□□ -0.59
CDH1-205ENST00000562836 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CDH1-205ENST00000562836 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDH1-205ENST00000562836 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
CDH1-205ENST00000562836 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
CDH1-205ENST00000562836 TRIM66O15016 1216 aa11.35□□□□□ -0.59
CDH1-205ENST00000562836 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
CDH1-205ENST00000562836 FOSBP53539 338 aa11.35□□□□□ -0.59
CDH1-205ENST00000562836 NAT2P11245 290 aa11.34□□□□□ -0.59
CDH1-205ENST00000562836 NAIF1Q69YI7 327 aaPredicted RBP11.34□□□□□ -0.59
CDH1-205ENST00000562836 C16orf87Q6PH81 154 aa11.34□□□□□ -0.59
CDH1-205ENST00000562836 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
CDH1-205ENST00000562836 CCDC15Q0P6D6 951 aa11.34□□□□□ -0.59
CDH1-205ENST00000562836 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
CDH1-205ENST00000562836 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
CDH1-205ENST00000562836 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
CDH1-205ENST00000562836 KINO60870 393 aaKnown RBP11.33□□□□□ -0.59
CDH1-205ENST00000562836 MAP2K2P36507 400 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 TRDNQ13061 729 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 TTC30AQ86WT1 665 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 TBC1D22AQ8WUA7 517 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 ETAA1Q9NY74 926 aa11.33□□□□□ -0.59
CDH1-205ENST00000562836 GOLGA6L6A8MZA4 724 aa11.33□□□□□ -0.6
CDH1-205ENST00000562836 TRAK2O60296 914 aa11.33□□□□□ -0.6
CDH1-205ENST00000562836 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
CDH1-205ENST00000562836 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
CDH1-205ENST00000562836 CLIP1P30622 1438 aa11.32□□□□□ -0.6
CDH1-205ENST00000562836 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
CDH1-205ENST00000562836 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
CDH1-205ENST00000562836 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
CDH1-205ENST00000562836 NOL7Q9UMY1 257 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms