RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
USB1-206ENST00000562534 TTC21AQ8NDW8 1320 aa22.62■■□□□ 1.21
USB1-206ENST00000562534 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
USB1-206ENST00000562534 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
USB1-206ENST00000562534 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
USB1-206ENST00000562534 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
USB1-206ENST00000562534 A0A1W2PP64 1363 aa22.6■■□□□ 1.21
USB1-206ENST00000562534 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
USB1-206ENST00000562534 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
USB1-206ENST00000562534 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
USB1-206ENST00000562534 NLRP6P59044 892 aa22.58■■□□□ 1.21
USB1-206ENST00000562534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
USB1-206ENST00000562534 HAP1P54257 671 aaPredicted RBP22.57■■□□□ 1.2
USB1-206ENST00000562534 CCDC7Q96M83 1385 aa22.57■■□□□ 1.2
USB1-206ENST00000562534 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
USB1-206ENST00000562534 TRPM3Q9HCF6 1732 aaPredicted RBP22.57■■□□□ 1.2
USB1-206ENST00000562534 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
USB1-206ENST00000562534 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
USB1-206ENST00000562534 NUTM2GQ5VZR2 741 aa22.56■■□□□ 1.2
USB1-206ENST00000562534 PANK3Q9H999 370 aa22.56■■□□□ 1.2
USB1-206ENST00000562534 CARD14Q9BXL6 1004 aa22.55■■□□□ 1.2
USB1-206ENST00000562534 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
USB1-206ENST00000562534 CABLES1Q8TDN4 633 aa22.54■■□□□ 1.2
USB1-206ENST00000562534 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
USB1-206ENST00000562534 MEX3CQ5U5Q3 659 aaKnown RBP22.52■■□□□ 1.2
USB1-206ENST00000562534 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
USB1-206ENST00000562534 ALS2Q96Q42 1657 aa22.52■■□□□ 1.2
USB1-206ENST00000562534 ADAMTS2O95450 1211 aa22.5■■□□□ 1.19
USB1-206ENST00000562534 NME9Q86XW9 330 aa22.5■■□□□ 1.19
USB1-206ENST00000562534 MON2Q7Z3U7 1717 aa22.5■■□□□ 1.19
USB1-206ENST00000562534 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
USB1-206ENST00000562534 FYB1O15117 783 aa22.49■■□□□ 1.19
USB1-206ENST00000562534 GCP02774 474 aa22.49■■□□□ 1.19
USB1-206ENST00000562534 KCNH5Q8NCM2 988 aa22.49■■□□□ 1.19
USB1-206ENST00000562534 KNSTRNQ9Y448 316 aa22.48■■□□□ 1.19
USB1-206ENST00000562534 USP19O94966 1318 aa22.48■■□□□ 1.19
USB1-206ENST00000562534 MYOM1P52179 1685 aa22.47■■□□□ 1.19
USB1-206ENST00000562534 COG3Q96JB2 828 aa22.47■■□□□ 1.19
USB1-206ENST00000562534 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
USB1-206ENST00000562534 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
USB1-206ENST00000562534 ZRANB1Q9UGI0 708 aa22.46■■□□□ 1.19
USB1-206ENST00000562534 NSD3Q9BZ95 1437 aa22.45■■□□□ 1.18
USB1-206ENST00000562534 MED1Q15648 1581 aaPredicted RBP22.44■■□□□ 1.18
USB1-206ENST00000562534 NRKQ7Z2Y5 1582 aa22.44■■□□□ 1.18
USB1-206ENST00000562534 C8orf37Q96NL8 207 aa22.44■■□□□ 1.18
USB1-206ENST00000562534 LRP6O75581 1613 aa22.43■■□□□ 1.18
USB1-206ENST00000562534 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
USB1-206ENST00000562534 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
USB1-206ENST00000562534 FAM83GA6ND36 823 aa22.42■■□□□ 1.18
USB1-206ENST00000562534 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
USB1-206ENST00000562534 ZC3H6P61129 1189 aaKnown RBP22.42■■□□□ 1.18
USB1-206ENST00000562534 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
USB1-206ENST00000562534 PIK3C2AO00443 1686 aa22.41■■□□□ 1.18
USB1-206ENST00000562534 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
USB1-206ENST00000562534 PRDM11Q9NQV5 511 aa22.4■■□□□ 1.18
USB1-206ENST00000562534 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
USB1-206ENST00000562534 CPDO75976 1380 aa22.38■■□□□ 1.17
USB1-206ENST00000562534 SOX12O15370 315 aa22.37■■□□□ 1.17
USB1-206ENST00000562534 ARHGEF25Q86VW2 580 aa22.37■■□□□ 1.17
USB1-206ENST00000562534 KIAA0232Q92628 1395 aa22.37■■□□□ 1.17
USB1-206ENST00000562534 AFF2P51816 1311 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 USP21Q9UK80 565 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 NSD2O96028 1365 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 SLIT3O75094 1523 aa22.36■■□□□ 1.17
USB1-206ENST00000562534 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
USB1-206ENST00000562534 AMER1Q5JTC6 1135 aaPredicted RBP22.35■■□□□ 1.17
USB1-206ENST00000562534 CHRNA2Q15822 529 aa22.34■■□□□ 1.17
USB1-206ENST00000562534 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
USB1-206ENST00000562534 UNC5CLQ8IV45 518 aa22.33■■□□□ 1.17
USB1-206ENST00000562534 BTG4Q9NY30 223 aa22.33■■□□□ 1.17
USB1-206ENST00000562534 CRYBG1Q9Y4K1 1723 aa22.33■■□□□ 1.17
USB1-206ENST00000562534 PHRF1Q9P1Y6 1649 aaKnown RBP22.32■■□□□ 1.16
USB1-206ENST00000562534 ZBTB7CA1YPR0 619 aa22.32■■□□□ 1.16
USB1-206ENST00000562534 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
USB1-206ENST00000562534 ABCA3Q99758 1704 aa22.31■■□□□ 1.16
USB1-206ENST00000562534 USP54Q70EL1 1684 aa22.31■■□□□ 1.16
USB1-206ENST00000562534 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
USB1-206ENST00000562534 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
USB1-206ENST00000562534 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
USB1-206ENST00000562534 NPC1L1Q9UHC9 1359 aa22.3■■□□□ 1.16
USB1-206ENST00000562534 EVA1CP58658 441 aa22.3■■□□□ 1.16
USB1-206ENST00000562534 TRPC5Q9UL62 973 aaPredicted RBP22.29■■□□□ 1.16
USB1-206ENST00000562534 SLIT2O94813 1529 aa22.29■■□□□ 1.16
USB1-206ENST00000562534 FBLN1P23142 703 aa22.28■■□□□ 1.16
USB1-206ENST00000562534 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
USB1-206ENST00000562534 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
USB1-206ENST00000562534 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.16
USB1-206ENST00000562534 AMPHP49418 695 aa22.27■■□□□ 1.16
USB1-206ENST00000562534 IP6K1Q92551 441 aa22.27■■□□□ 1.16
USB1-206ENST00000562534 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
USB1-206ENST00000562534 NFAT5O94916 1531 aa22.26■■□□□ 1.15
USB1-206ENST00000562534 AXIN2Q9Y2T1 843 aa22.26■■□□□ 1.15
USB1-206ENST00000562534 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
USB1-206ENST00000562534 TNNT2P45379 298 aaPredicted RBP22.25■■□□□ 1.15
USB1-206ENST00000562534 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
USB1-206ENST00000562534 VPS72Q15906 364 aa22.24■■□□□ 1.15
USB1-206ENST00000562534 POTEAQ6S8J7 498 aa22.24■■□□□ 1.15
USB1-206ENST00000562534 STRN4Q9NRL3 753 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms