RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 DDX56Q9NY93 547 aaKnown RBP9.34□□□□□ -0.91
NEMF-209ENST00000556074 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
NEMF-209ENST00000556074 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
NEMF-209ENST00000556074 CXorf38Q8TB03 319 aa9.34□□□□□ -0.91
NEMF-209ENST00000556074 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
NEMF-209ENST00000556074 STK10O94804 968 aaKnown RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 S100BP04271 92 aaPredicted RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
NEMF-209ENST00000556074 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
NEMF-209ENST00000556074 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 PDE6BP35913 854 aa9.33□□□□□ -0.92
NEMF-209ENST00000556074 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 PDIA6Q15084 440 aa9.33□□□□□ -0.92
NEMF-209ENST00000556074 BSDC1Q9NW68 430 aaPredicted RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 MAP3K20Q9NYL2 800 aaKnown RBP9.33□□□□□ -0.92
NEMF-209ENST00000556074 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
NEMF-209ENST00000556074 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
NEMF-209ENST00000556074 TRIM34Q9BYJ4 488 aa9.32□□□□□ -0.92
NEMF-209ENST00000556074 HIC1Q14526 733 aa9.32□□□□□ -0.92
NEMF-209ENST00000556074 GET4Q7L5D6 327 aaPredicted RBP9.32□□□□□ -0.92
NEMF-209ENST00000556074 ERBB3P21860 1342 aa9.32□□□□□ -0.92
NEMF-209ENST00000556074 GLIPR1L2Q4G1C9 344 aa9.31□□□□□ -0.92
NEMF-209ENST00000556074 RNF187Q5TA31 235 aaPredicted RBP9.31□□□□□ -0.92
NEMF-209ENST00000556074 SWAP70Q9UH65 585 aa9.31□□□□□ -0.92
NEMF-209ENST00000556074 SCAMP3O14828 347 aaKnown RBP9.31□□□□□ -0.92
NEMF-209ENST00000556074 SCNN1AP37088 669 aa9.31□□□□□ -0.92
NEMF-209ENST00000556074 METTL16Q86W50 562 aaKnown RBP9.31□□□□□ -0.92
NEMF-209ENST00000556074 NT5DC4Q86YG4 428 aa9.31□□□□□ -0.92
NEMF-209ENST00000556074 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
NEMF-209ENST00000556074 RPGRIP1LQ68CZ1 1315 aa9.3□□□□□ -0.92
NEMF-209ENST00000556074 POLD1P28340 1107 aa9.3□□□□□ -0.92
NEMF-209ENST00000556074 XPCQ01831 940 aaPredicted RBP9.3□□□□□ -0.92
NEMF-209ENST00000556074 IL17RAQ96F46 866 aa9.3□□□□□ -0.92
NEMF-209ENST00000556074 PRC1O43663 620 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 MAP9Q49MG5 647 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 HSD3B2P26439 372 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
NEMF-209ENST00000556074 MDM2Q00987 491 aaPredicted RBP9.29□□□□□ -0.92
NEMF-209ENST00000556074 MRPL58Q14197 206 aaKnown RBP9.29□□□□□ -0.92
NEMF-209ENST00000556074 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 MAFBQ9Y5Q3 323 aaPredicted RBP9.29□□□□□ -0.92
NEMF-209ENST00000556074 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 ZNF512BQ96KM6 892 aaPredicted RBP9.29□□□□□ -0.92
NEMF-209ENST00000556074 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
NEMF-209ENST00000556074 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
NEMF-209ENST00000556074 ZKSCAN2Q63HK3 967 aa9.28□□□□□ -0.92
NEMF-209ENST00000556074 CAPN10Q9HC96 672 aa9.28□□□□□ -0.92
NEMF-209ENST00000556074 CCDC180Q9P1Z9 1646 aa9.28□□□□□ -0.92
NEMF-209ENST00000556074 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 SFMBT1Q9UHJ3 866 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 TPX2Q9ULW0 747 aaKnown RBP9.27□□□□□ -0.93
NEMF-209ENST00000556074 TNNI2P48788 182 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 ARMCX6Q7L4S7 300 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 ALG2Q9H553 416 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
NEMF-209ENST00000556074 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
NEMF-209ENST00000556074 RBL2Q08999 1139 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 VAC14Q08AM6 782 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 SLC43A3Q8NBI5 491 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■■□ 21.5
NEMF-209ENST00000556074 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEMF-209ENST00000556074 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 COPB2P35606 906 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 ARMC5Q96C12 935 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 INO80BQ9C086 356 aaPredicted RBP9.26□□□□□ -0.93
NEMF-209ENST00000556074 LIMD1Q9UGP4 676 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
NEMF-209ENST00000556074 CLGNO14967 610 aa9.25□□□□□ -0.93
NEMF-209ENST00000556074 DHX16O60231 1041 aaKnown RBP9.25□□□□□ -0.93
NEMF-209ENST00000556074 GPR37L1O60883 481 aa9.25□□□□□ -0.93
NEMF-209ENST00000556074 CLCN1P35523 988 aa9.25□□□□□ -0.93
NEMF-209ENST00000556074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
NEMF-209ENST00000556074 GIGYF1O75420 1035 aaPredicted RBP9.25□□□□□ -0.93
NEMF-209ENST00000556074 DNAJA1P31689 397 aaKnown RBP9.25□□□□□ -0.93
NEMF-209ENST00000556074 DHX8Q14562 1220 aaKnown RBP9.25□□□□□ -0.93
NEMF-209ENST00000556074 OSBPL2Q9H1P3 480 aa9.25□□□□□ -0.93
NEMF-209ENST00000556074 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
NEMF-209ENST00000556074 TTC36A6NLP5 189 aa9.24□□□□□ -0.93
NEMF-209ENST00000556074 FCHSD2O94868 740 aa9.24□□□□□ -0.93
NEMF-209ENST00000556074 UBE4AQ14139 1066 aa9.24□□□□□ -0.93
NEMF-209ENST00000556074 ACBD3Q9H3P7 528 aa9.24□□□□□ -0.93
NEMF-209ENST00000556074 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
NEMF-209ENST00000556074 SLC39A13Q96H72 371 aa9.24□□□□□ -0.93
NEMF-209ENST00000556074 AMPD3Q01432 767 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 TSC1Q92574 1164 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
NEMF-209ENST00000556074 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 C1orf131Q8NDD1 294 aaKnown RBP9.23□□□□□ -0.93
NEMF-209ENST00000556074 PCGF5Q86SE9 256 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 NLRP2Q9NX02 1062 aa9.23□□□□□ -0.93
NEMF-209ENST00000556074 PDGFRBP09619 1106 aa9.22□□□□□ -0.93
NEMF-209ENST00000556074 TSPAN18Q96SJ8 248 aa9.22□□□□□ -0.93
NEMF-209ENST00000556074 EPAS1Q99814 870 aa9.22□□□□□ -0.93
NEMF-209ENST00000556074 PAGR1Q9BTK6 254 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1100 ms