RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
SEC23A-209ENST00000555363 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
SEC23A-209ENST00000555363 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
SEC23A-209ENST00000555363 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
SEC23A-209ENST00000555363 SIAH2O43255 324 aa11.74□□□□□ -0.53
SEC23A-209ENST00000555363 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
SEC23A-209ENST00000555363 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
SEC23A-209ENST00000555363 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
SEC23A-209ENST00000555363 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
SEC23A-209ENST00000555363 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
SEC23A-209ENST00000555363 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
SEC23A-209ENST00000555363 AGERQ15109 404 aa11.72□□□□□ -0.53
SEC23A-209ENST00000555363 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
SEC23A-209ENST00000555363 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
SEC23A-209ENST00000555363 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
SEC23A-209ENST00000555363 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
SEC23A-209ENST00000555363 CAPN5O15484 640 aaPredicted RBP11.7□□□□□ -0.54
SEC23A-209ENST00000555363 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
SEC23A-209ENST00000555363 QPCTQ16769 361 aa11.7□□□□□ -0.54
SEC23A-209ENST00000555363 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
SEC23A-209ENST00000555363 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
SEC23A-209ENST00000555363 KIFC2Q96AC6 838 aa11.69□□□□□ -0.54
SEC23A-209ENST00000555363 LILRB3O75022 631 aa11.67□□□□□ -0.54
SEC23A-209ENST00000555363 ARID5BQ14865 1188 aa11.67□□□□□ -0.54
SEC23A-209ENST00000555363 TUSC1Q2TAM9 212 aa11.67□□□□□ -0.54
SEC23A-209ENST00000555363 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
SEC23A-209ENST00000555363 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
SEC23A-209ENST00000555363 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
SEC23A-209ENST00000555363 TRIM47Q96LD4 638 aa11.66□□□□□ -0.54
SEC23A-209ENST00000555363 SNRPBP14678 240 aaKnown RBP11.65□□□□□ -0.54
SEC23A-209ENST00000555363 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
SEC23A-209ENST00000555363 NNTQ13423 1086 aa11.64□□□□□ -0.55
SEC23A-209ENST00000555363 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
SEC23A-209ENST00000555363 FOXJ1Q92949 421 aa11.64□□□□□ -0.55
SEC23A-209ENST00000555363 WFS1O76024 890 aa11.63□□□□□ -0.55
SEC23A-209ENST00000555363 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
SEC23A-209ENST00000555363 BMP1P13497 986 aa11.62□□□□□ -0.55
SEC23A-209ENST00000555363 MPNDQ8N594 471 aa11.61□□□□□ -0.55
SEC23A-209ENST00000555363 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
SEC23A-209ENST00000555363 ADH1CP00326 375 aa11.59□□□□□ -0.55
SEC23A-209ENST00000555363 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
SEC23A-209ENST00000555363 KDM4CQ9H3R0 1056 aa11.59□□□□□ -0.55
SEC23A-209ENST00000555363 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
SEC23A-209ENST00000555363 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
SEC23A-209ENST00000555363 TRIM46Q7Z4K8 759 aa11.57□□□□□ -0.56
SEC23A-209ENST00000555363 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
SEC23A-209ENST00000555363 SCARF1Q14162 830 aa11.56□□□□□ -0.56
SEC23A-209ENST00000555363 SKIV2LQ15477 1246 aaKnown RBP11.56□□□□□ -0.56
SEC23A-209ENST00000555363 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
SEC23A-209ENST00000555363 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
SEC23A-209ENST00000555363 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
SEC23A-209ENST00000555363 NR5A1Q13285 461 aa11.54□□□□□ -0.56
SEC23A-209ENST00000555363 CDK15Q96Q40 435 aa11.54□□□□□ -0.56
SEC23A-209ENST00000555363 TIMP2P16035 220 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
SEC23A-209ENST00000555363 C4orf48Q5BLP8 95 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 ZFP42Q96MM3 310 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 FAM117AQ9C073 453 aa11.53□□□□□ -0.56
SEC23A-209ENST00000555363 MRPL14Q6P1L8 145 aaKnown RBP11.52□□□□□ -0.57
SEC23A-209ENST00000555363 VASH1Q7L8A9 365 aaPredicted RBP11.52□□□□□ -0.57
SEC23A-209ENST00000555363 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
SEC23A-209ENST00000555363 ZIC2O95409 532 aaPredicted RBP11.51□□□□□ -0.57
SEC23A-209ENST00000555363 PROCA1Q8NCQ7 364 aaPredicted RBP11.51□□□□□ -0.57
SEC23A-209ENST00000555363 GPKOWQ92917 476 aaPredicted RBP eCLIP11.51□□□□□ -0.57
SEC23A-209ENST00000555363 PURBQ96QR8 312 aaKnown RBP11.5□□□□□ -0.57
SEC23A-209ENST00000555363 FSHRP23945 695 aa11.49□□□□□ -0.57
SEC23A-209ENST00000555363 LCE2AQ5TA79 106 aaPredicted RBP11.49□□□□□ -0.57
SEC23A-209ENST00000555363 LRRN4Q8WUT4 740 aa11.49□□□□□ -0.57
SEC23A-209ENST00000555363 AP1G2O75843 785 aa11.48□□□□□ -0.57
SEC23A-209ENST00000555363 UPP2O95045 317 aa11.48□□□□□ -0.57
SEC23A-209ENST00000555363 ZFAND3Q9H8U3 227 aa11.48□□□□□ -0.57
SEC23A-209ENST00000555363 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
SEC23A-209ENST00000555363 NR3C2P08235 984 aa11.47□□□□□ -0.57
SEC23A-209ENST00000555363 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
SEC23A-209ENST00000555363 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
SEC23A-209ENST00000555363 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
SEC23A-209ENST00000555363 ARHGAP9Q9BRR9 750 aa11.47□□□□□ -0.57
SEC23A-209ENST00000555363 GRM5P41594 1212 aa11.46□□□□□ -0.57
SEC23A-209ENST00000555363 C6orf118Q5T5N4 469 aa11.46□□□□□ -0.57
SEC23A-209ENST00000555363 C1QTNF2Q9BXJ5 285 aa11.46□□□□□ -0.57
SEC23A-209ENST00000555363 ZBTB33Q86T24 672 aa11.45□□□□□ -0.58
SEC23A-209ENST00000555363 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
SEC23A-209ENST00000555363 INSM1Q01101 510 aaPredicted RBP11.44□□□□□ -0.58
SEC23A-209ENST00000555363 NR6A1Q15406 480 aa11.44□□□□□ -0.58
SEC23A-209ENST00000555363 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
SEC23A-209ENST00000555363 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
SEC23A-209ENST00000555363 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
SEC23A-209ENST00000555363 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.44□□□□□ -0.58
SEC23A-209ENST00000555363 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
SEC23A-209ENST00000555363 MAP4K5Q9Y4K4 846 aa11.44□□□□□ -0.58
SEC23A-209ENST00000555363 BMP2P12643 396 aa11.43□□□□□ -0.58
SEC23A-209ENST00000555363 PPP2R2DQ66LE6 453 aa11.43□□□□□ -0.58
SEC23A-209ENST00000555363 SLC10A4Q96EP9 437 aa11.43□□□□□ -0.58
SEC23A-209ENST00000555363 VEGFBP49765 207 aa11.42□□□□□ -0.58
SEC23A-209ENST00000555363 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
SEC23A-209ENST00000555363 CCDC116Q8IYX3 515 aa11.42□□□□□ -0.58
SEC23A-209ENST00000555363 EMILIN1Q9Y6C2 1016 aa11.42□□□□□ -0.58
SEC23A-209ENST00000555363 MAN1A2O60476 641 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms