RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
PRIM1-207ENST00000552408 TSC1Q92574 1164 aa9.93□□□□□ -0.82
PRIM1-207ENST00000552408 ZNF511Q8NB15 262 aa9.92□□□□□ -0.82
PRIM1-207ENST00000552408 RTL5Q5HYW3 569 aaPredicted RBP9.91□□□□□ -0.82
PRIM1-207ENST00000552408 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
PRIM1-207ENST00000552408 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
PRIM1-207ENST00000552408 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
PRIM1-207ENST00000552408 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
PRIM1-207ENST00000552408 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
PRIM1-207ENST00000552408 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
PRIM1-207ENST00000552408 BMP1P13497 986 aa9.89□□□□□ -0.83
PRIM1-207ENST00000552408 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
PRIM1-207ENST00000552408 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
PRIM1-207ENST00000552408 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
PRIM1-207ENST00000552408 LILRB3O75022 631 aa9.88□□□□□ -0.83
PRIM1-207ENST00000552408 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
PRIM1-207ENST00000552408 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
PRIM1-207ENST00000552408 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
PRIM1-207ENST00000552408 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
PRIM1-207ENST00000552408 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
PRIM1-207ENST00000552408 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
PRIM1-207ENST00000552408 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
PRIM1-207ENST00000552408 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
PRIM1-207ENST00000552408 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
PRIM1-207ENST00000552408 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
PRIM1-207ENST00000552408 VARSP26640 1264 aaKnown RBP9.82□□□□□ -0.84
PRIM1-207ENST00000552408 NNTQ13423 1086 aa9.82□□□□□ -0.84
PRIM1-207ENST00000552408 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
PRIM1-207ENST00000552408 FAM117AQ9C073 453 aa9.82□□□□□ -0.84
PRIM1-207ENST00000552408 ARID5BQ14865 1188 aa9.81□□□□□ -0.84
PRIM1-207ENST00000552408 PROCA1Q8NCQ7 364 aaPredicted RBP9.81□□□□□ -0.84
PRIM1-207ENST00000552408 KDM4CQ9H3R0 1056 aa9.81□□□□□ -0.84
PRIM1-207ENST00000552408 NFX1Q12986 1120 aaKnown RBP9.8□□□□□ -0.84
PRIM1-207ENST00000552408 CTDSPL2Q05D32 466 aa9.79□□□□□ -0.84
PRIM1-207ENST00000552408 AGERQ15109 404 aa9.79□□□□□ -0.84
PRIM1-207ENST00000552408 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
PRIM1-207ENST00000552408 WFS1O76024 890 aa9.78□□□□□ -0.84
PRIM1-207ENST00000552408 FAM174AQ8TBP5 190 aa9.78□□□□□ -0.84
PRIM1-207ENST00000552408 BCANQ96GW7 911 aa9.78□□□□□ -0.84
PRIM1-207ENST00000552408 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
PRIM1-207ENST00000552408 NR3C2P08235 984 aa9.77□□□□□ -0.85
PRIM1-207ENST00000552408 TIMP2P16035 220 aa9.77□□□□□ -0.85
PRIM1-207ENST00000552408 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
PRIM1-207ENST00000552408 ADH1CP00326 375 aa9.76□□□□□ -0.85
PRIM1-207ENST00000552408 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
PRIM1-207ENST00000552408 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
PRIM1-207ENST00000552408 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
PRIM1-207ENST00000552408 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
PRIM1-207ENST00000552408 ZFAND3Q9H8U3 227 aa9.76□□□□□ -0.85
PRIM1-207ENST00000552408 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
PRIM1-207ENST00000552408 MPNDQ8N594 471 aa9.75□□□□□ -0.85
PRIM1-207ENST00000552408 ZFP42Q96MM3 310 aa9.75□□□□□ -0.85
PRIM1-207ENST00000552408 CDK15Q96Q40 435 aa9.75□□□□□ -0.85
PRIM1-207ENST00000552408 GRM5P41594 1212 aa9.74□□□□□ -0.85
PRIM1-207ENST00000552408 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 TERTO14746 1132 aaKnown RBP9.73□□□□□ -0.85
PRIM1-207ENST00000552408 VEGFBP49765 207 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
PRIM1-207ENST00000552408 KIFC2Q96AC6 838 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 ITPKCQ96DU7 683 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
PRIM1-207ENST00000552408 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
PRIM1-207ENST00000552408 SH3BP5LQ7L8J4 393 aa9.72□□□□□ -0.85
PRIM1-207ENST00000552408 SH3RF1Q7Z6J0 888 aa9.72□□□□□ -0.85
PRIM1-207ENST00000552408 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
PRIM1-207ENST00000552408 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
PRIM1-207ENST00000552408 C1QTNF2Q9BXJ5 285 aa9.72□□□□□ -0.85
PRIM1-207ENST00000552408 ATP1B4Q9UN42 357 aaPredicted RBP9.72□□□□□ -0.85
PRIM1-207ENST00000552408 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.86
PRIM1-207ENST00000552408 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
PRIM1-207ENST00000552408 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
PRIM1-207ENST00000552408 NR6A1Q15406 480 aa9.7□□□□□ -0.86
PRIM1-207ENST00000552408 FSHRP23945 695 aa9.69□□□□□ -0.86
PRIM1-207ENST00000552408 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
PRIM1-207ENST00000552408 AP1G2O75843 785 aa9.68□□□□□ -0.86
PRIM1-207ENST00000552408 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
PRIM1-207ENST00000552408 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
PRIM1-207ENST00000552408 ARMC2Q8NEN0 867 aa9.68□□□□□ -0.86
PRIM1-207ENST00000552408 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
PRIM1-207ENST00000552408 HMX1Q9NP08 348 aaPredicted RBP9.67□□□□□ -0.86
PRIM1-207ENST00000552408 NR5A1Q13285 461 aa9.66□□□□□ -0.86
PRIM1-207ENST00000552408 ERFEQ4G0M1 354 aa9.66□□□□□ -0.86
PRIM1-207ENST00000552408 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
PRIM1-207ENST00000552408 VASH1Q7L8A9 365 aaPredicted RBP9.66□□□□□ -0.86
PRIM1-207ENST00000552408 OCSTAMPQ9BR26 566 aa9.66□□□□□ -0.86
PRIM1-207ENST00000552408 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.86
PRIM1-207ENST00000552408 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
PRIM1-207ENST00000552408 FKBPLQ9UIM3 349 aa9.64□□□□□ -0.87
PRIM1-207ENST00000552408 SCARF1Q14162 830 aa9.63□□□□□ -0.87
PRIM1-207ENST00000552408 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
PRIM1-207ENST00000552408 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
PRIM1-207ENST00000552408 WIPF1O43516 503 aa9.62□□□□□ -0.87
PRIM1-207ENST00000552408 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
PRIM1-207ENST00000552408 GMPRP36959 345 aa9.61□□□□□ -0.87
PRIM1-207ENST00000552408 MAP4K5Q9Y4K4 846 aa9.61□□□□□ -0.87
PRIM1-207ENST00000552408 RFC5P40937 340 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 CBLBQ13191 982 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
PRIM1-207ENST00000552408 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms