RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 CTHP32929 405 aa10.83□□□□□ -0.68
LINC02404-201ENST00000546710 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
LINC02404-201ENST00000546710 SH3D19Q5HYK7 790 aa10.83□□□□□ -0.68
LINC02404-201ENST00000546710 SH3BP2P78314 561 aa10.82□□□□□ -0.68
LINC02404-201ENST00000546710 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
LINC02404-201ENST00000546710 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
LINC02404-201ENST00000546710 PROCA1Q8NCQ7 364 aaPredicted RBP10.81□□□□□ -0.68
LINC02404-201ENST00000546710 SNIP1Q8TAD8 396 aaKnown RBP10.81□□□□□ -0.68
LINC02404-201ENST00000546710 BAP1Q92560 729 aa10.81□□□□□ -0.68
LINC02404-201ENST00000546710 MAP10Q9P2G4 905 aa10.81□□□□□ -0.68
LINC02404-201ENST00000546710 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
LINC02404-201ENST00000546710 J3QL48 77 aa10.79□□□□□ -0.68
LINC02404-201ENST00000546710 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
LINC02404-201ENST00000546710 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
LINC02404-201ENST00000546710 SMPD1P17405 629 aa10.78□□□□□ -0.68
LINC02404-201ENST00000546710 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
LINC02404-201ENST00000546710 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
LINC02404-201ENST00000546710 ATP1B4Q9UN42 357 aaPredicted RBP10.78□□□□□ -0.68
LINC02404-201ENST00000546710 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
LINC02404-201ENST00000546710 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC02404-201ENST00000546710 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
LINC02404-201ENST00000546710 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
LINC02404-201ENST00000546710 SIAH2O43255 324 aa10.75□□□□□ -0.69
LINC02404-201ENST00000546710 AVPP01185 164 aa10.75□□□□□ -0.69
LINC02404-201ENST00000546710 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
LINC02404-201ENST00000546710 CTDSPL2Q05D32 466 aa10.74□□□□□ -0.69
LINC02404-201ENST00000546710 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
LINC02404-201ENST00000546710 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
LINC02404-201ENST00000546710 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
LINC02404-201ENST00000546710 POTECB2RU33 542 aa10.72□□□□□ -0.69
LINC02404-201ENST00000546710 PPP2R2DQ66LE6 453 aa10.72□□□□□ -0.69
LINC02404-201ENST00000546710 CRIPAKQ8N1N5 446 aa10.72□□□□□ -0.69
LINC02404-201ENST00000546710 HPS1Q92902 700 aa10.71□□□□□ -0.69
LINC02404-201ENST00000546710 AXIN1O15169 862 aa10.7□□□□□ -0.7
LINC02404-201ENST00000546710 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
LINC02404-201ENST00000546710 FOXJ1Q92949 421 aa10.7□□□□□ -0.7
LINC02404-201ENST00000546710 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
LINC02404-201ENST00000546710 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
LINC02404-201ENST00000546710 VARSP26640 1264 aaKnown RBP10.69□□□□□ -0.7
LINC02404-201ENST00000546710 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
LINC02404-201ENST00000546710 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
LINC02404-201ENST00000546710 AP1G2O75843 785 aa10.67□□□□□ -0.7
LINC02404-201ENST00000546710 TREML4Q6UXN2 200 aa10.67□□□□□ -0.7
LINC02404-201ENST00000546710 GOPCQ9HD26 462 aa10.67□□□□□ -0.7
LINC02404-201ENST00000546710 AGERQ15109 404 aa10.66□□□□□ -0.7
LINC02404-201ENST00000546710 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
LINC02404-201ENST00000546710 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
LINC02404-201ENST00000546710 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
LINC02404-201ENST00000546710 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
LINC02404-201ENST00000546710 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
LINC02404-201ENST00000546710 RFC5P40937 340 aa10.64□□□□□ -0.71
LINC02404-201ENST00000546710 BPHLQ86WA6 291 aaPredicted RBP10.64□□□□□ -0.71
LINC02404-201ENST00000546710 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
LINC02404-201ENST00000546710 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
LINC02404-201ENST00000546710 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
LINC02404-201ENST00000546710 NR6A1Q15406 480 aa10.62□□□□□ -0.71
LINC02404-201ENST00000546710 MPNDQ8N594 471 aa10.62□□□□□ -0.71
LINC02404-201ENST00000546710 ARID5BQ14865 1188 aa10.61□□□□□ -0.71
LINC02404-201ENST00000546710 SH3BP5LQ7L8J4 393 aa10.61□□□□□ -0.71
LINC02404-201ENST00000546710 GMPR2Q9P2T1 348 aaKnown RBP10.61□□□□□ -0.71
LINC02404-201ENST00000546710 USP17L8P0C7I0 530 aa10.6□□□□□ -0.71
LINC02404-201ENST00000546710 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
LINC02404-201ENST00000546710 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
LINC02404-201ENST00000546710 NNTQ13423 1086 aa10.59□□□□□ -0.71
LINC02404-201ENST00000546710 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
LINC02404-201ENST00000546710 CDK15Q96Q40 435 aa10.59□□□□□ -0.71
LINC02404-201ENST00000546710 HMX1Q9NP08 348 aaPredicted RBP10.59□□□□□ -0.71
LINC02404-201ENST00000546710 FKBPLQ9UIM3 349 aa10.59□□□□□ -0.71
LINC02404-201ENST00000546710 MAGEB6P1A0A0J9YX57 407 aa10.58□□□□□ -0.72
LINC02404-201ENST00000546710 LCE2AQ5TA79 106 aaPredicted RBP10.58□□□□□ -0.72
LINC02404-201ENST00000546710 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
LINC02404-201ENST00000546710 NACADO15069 1562 aa10.57□□□□□ -0.72
LINC02404-201ENST00000546710 ADH1CP00326 375 aa10.57□□□□□ -0.72
LINC02404-201ENST00000546710 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
LINC02404-201ENST00000546710 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
LINC02404-201ENST00000546710 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
LINC02404-201ENST00000546710 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
LINC02404-201ENST00000546710 GRM5P41594 1212 aa10.55□□□□□ -0.72
LINC02404-201ENST00000546710 TMEM259Q4ZIN3 620 aa10.55□□□□□ -0.72
LINC02404-201ENST00000546710 PDXDC2PQ6P474 469 aa10.55□□□□□ -0.72
LINC02404-201ENST00000546710 WFS1O76024 890 aa10.54□□□□□ -0.72
LINC02404-201ENST00000546710 ARHGAP9Q9BRR9 750 aa10.54□□□□□ -0.72
LINC02404-201ENST00000546710 BMP1P13497 986 aa10.53□□□□□ -0.72
LINC02404-201ENST00000546710 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
LINC02404-201ENST00000546710 ZC3H4Q9UPT8 1303 aaKnown RBP10.53□□□□□ -0.72
LINC02404-201ENST00000546710 NR3C2P08235 984 aa10.52□□□□□ -0.73
LINC02404-201ENST00000546710 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
LINC02404-201ENST00000546710 NR5A1Q13285 461 aa10.52□□□□□ -0.73
LINC02404-201ENST00000546710 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
LINC02404-201ENST00000546710 TIMP2P16035 220 aa10.51□□□□□ -0.73
LINC02404-201ENST00000546710 VASH1Q7L8A9 365 aaPredicted RBP10.51□□□□□ -0.73
LINC02404-201ENST00000546710 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
LINC02404-201ENST00000546710 KLF16Q9BXK1 252 aaPredicted RBP10.51□□□□□ -0.73
LINC02404-201ENST00000546710 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
LINC02404-201ENST00000546710 MAP4K5Q9Y4K4 846 aa10.51□□□□□ -0.73
LINC02404-201ENST00000546710 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
LINC02404-201ENST00000546710 FSHRP23945 695 aa10.5□□□□□ -0.73
LINC02404-201ENST00000546710 TRIM46Q7Z4K8 759 aa10.5□□□□□ -0.73
LINC02404-201ENST00000546710 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
LINC02404-201ENST00000546710 PTK2Q05397 1052 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms