RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 SH3BP2P78314 561 aa13.65□□□□□ -0.22
AC078880.1-201ENST00000546696 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
AC078880.1-201ENST00000546696 HPS1Q92902 700 aa13.65□□□□□ -0.22
AC078880.1-201ENST00000546696 GMPR2Q9P2T1 348 aaKnown RBP13.65□□□□□ -0.22
AC078880.1-201ENST00000546696 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
AC078880.1-201ENST00000546696 BAP1Q92560 729 aa13.64□□□□□ -0.23
AC078880.1-201ENST00000546696 FAM117AQ9C073 453 aa13.64□□□□□ -0.23
AC078880.1-201ENST00000546696 F12P00748 615 aaPredicted RBP13.63□□□□□ -0.23
AC078880.1-201ENST00000546696 LINC01559Q495D7 138 aa13.63□□□□□ -0.23
AC078880.1-201ENST00000546696 TSC1Q92574 1164 aa13.63□□□□□ -0.23
AC078880.1-201ENST00000546696 SKIV2LQ15477 1246 aaKnown RBP13.62□□□□□ -0.23
AC078880.1-201ENST00000546696 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
AC078880.1-201ENST00000546696 PER1O15534 1290 aaPredicted RBP13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 ALDH1A1P00352 501 aa13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 SMCPP49901 116 aaPredicted RBP13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
AC078880.1-201ENST00000546696 SIAH2O43255 324 aa13.6□□□□□ -0.23
AC078880.1-201ENST00000546696 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
AC078880.1-201ENST00000546696 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
AC078880.1-201ENST00000546696 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
AC078880.1-201ENST00000546696 VARSP26640 1264 aaKnown RBP13.55□□□□□ -0.24
AC078880.1-201ENST00000546696 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
AC078880.1-201ENST00000546696 PROCA1Q8NCQ7 364 aaPredicted RBP13.53□□□□□ -0.24
AC078880.1-201ENST00000546696 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC078880.1-201ENST00000546696 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
AC078880.1-201ENST00000546696 ARMC2Q8NEN0 867 aa13.51□□□□□ -0.25
AC078880.1-201ENST00000546696 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
AC078880.1-201ENST00000546696 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
AC078880.1-201ENST00000546696 PPP2R2DQ66LE6 453 aa13.5□□□□□ -0.25
AC078880.1-201ENST00000546696 MPNDQ8N594 471 aa13.5□□□□□ -0.25
AC078880.1-201ENST00000546696 SNRPBP14678 240 aaKnown RBP13.49□□□□□ -0.25
AC078880.1-201ENST00000546696 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
AC078880.1-201ENST00000546696 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
AC078880.1-201ENST00000546696 FAM174AQ8TBP5 190 aa13.48□□□□□ -0.25
AC078880.1-201ENST00000546696 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
AC078880.1-201ENST00000546696 FBXO31Q5XUX0 539 aaPredicted RBP13.46□□□□□ -0.25
AC078880.1-201ENST00000546696 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
AC078880.1-201ENST00000546696 BMP1P13497 986 aa13.45□□□□□ -0.26
AC078880.1-201ENST00000546696 AGERQ15109 404 aa13.45□□□□□ -0.26
AC078880.1-201ENST00000546696 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
AC078880.1-201ENST00000546696 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
AC078880.1-201ENST00000546696 C4orf48Q5BLP8 95 aa13.42□□□□□ -0.26
AC078880.1-201ENST00000546696 TREML4Q6UXN2 200 aa13.42□□□□□ -0.26
AC078880.1-201ENST00000546696 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
AC078880.1-201ENST00000546696 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
AC078880.1-201ENST00000546696 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
AC078880.1-201ENST00000546696 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
AC078880.1-201ENST00000546696 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
AC078880.1-201ENST00000546696 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
AC078880.1-201ENST00000546696 LCE2AQ5TA79 106 aaPredicted RBP13.4□□□□□ -0.26
AC078880.1-201ENST00000546696 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
AC078880.1-201ENST00000546696 AP1G2O75843 785 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 ADH1CP00326 375 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 NNTQ13423 1086 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 TRIM46Q7Z4K8 759 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
AC078880.1-201ENST00000546696 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
AC078880.1-201ENST00000546696 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
AC078880.1-201ENST00000546696 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
AC078880.1-201ENST00000546696 SENP2Q9HC62 589 aa13.38□□□□□ -0.27
AC078880.1-201ENST00000546696 C1QTNF2Q9BXJ5 285 aa13.37□□□□□ -0.27
AC078880.1-201ENST00000546696 RFC5P40937 340 aa13.35□□□□□ -0.27
AC078880.1-201ENST00000546696 FKBPLQ9UIM3 349 aa13.35□□□□□ -0.27
AC078880.1-201ENST00000546696 WFS1O76024 890 aa13.34□□□□□ -0.27
AC078880.1-201ENST00000546696 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
AC078880.1-201ENST00000546696 NR6A1Q15406 480 aa13.34□□□□□ -0.27
AC078880.1-201ENST00000546696 PDXDC2PQ6P474 469 aa13.34□□□□□ -0.27
AC078880.1-201ENST00000546696 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
AC078880.1-201ENST00000546696 NR5A1Q13285 461 aa13.33□□□□□ -0.28
AC078880.1-201ENST00000546696 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
AC078880.1-201ENST00000546696 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
AC078880.1-201ENST00000546696 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
AC078880.1-201ENST00000546696 GRM5P41594 1212 aa13.32□□□□□ -0.28
AC078880.1-201ENST00000546696 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
AC078880.1-201ENST00000546696 LCE2CQ5TA81 110 aa13.31□□□□□ -0.28
AC078880.1-201ENST00000546696 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
AC078880.1-201ENST00000546696 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
AC078880.1-201ENST00000546696 TIMP2P16035 220 aa13.3□□□□□ -0.28
AC078880.1-201ENST00000546696 WDR4P57081 412 aaKnown RBP13.3□□□□□ -0.28
AC078880.1-201ENST00000546696 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
AC078880.1-201ENST00000546696 TMEM259Q4ZIN3 620 aa13.29□□□□□ -0.28
AC078880.1-201ENST00000546696 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
AC078880.1-201ENST00000546696 ERFEQ4G0M1 354 aa13.28□□□□□ -0.28
AC078880.1-201ENST00000546696 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
AC078880.1-201ENST00000546696 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
AC078880.1-201ENST00000546696 NR3C2P08235 984 aa13.27□□□□□ -0.29
AC078880.1-201ENST00000546696 VASH1Q7L8A9 365 aaPredicted RBP13.27□□□□□ -0.29
AC078880.1-201ENST00000546696 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.29
AC078880.1-201ENST00000546696 TERTO14746 1132 aaKnown RBP13.26□□□□□ -0.29
AC078880.1-201ENST00000546696 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
AC078880.1-201ENST00000546696 ZFAND3Q9H8U3 227 aa13.26□□□□□ -0.29
AC078880.1-201ENST00000546696 GPSM3Q9Y4H4 160 aa13.26□□□□□ -0.29
AC078880.1-201ENST00000546696 FSHRP23945 695 aa13.25□□□□□ -0.29
AC078880.1-201ENST00000546696 PTK2Q05397 1052 aa13.25□□□□□ -0.29
AC078880.1-201ENST00000546696 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
AC078880.1-201ENST00000546696 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
AC078880.1-201ENST00000546696 ITPKCQ96DU7 683 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms