RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
SNHG1-224ENST00000545688 SH3BP2P78314 561 aa11.42□□□□□ -0.58
SNHG1-224ENST00000545688 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
SNHG1-224ENST00000545688 BAP1Q92560 729 aa11.42□□□□□ -0.58
SNHG1-224ENST00000545688 FBXO31Q5XUX0 539 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-224ENST00000545688 SMPD1P17405 629 aa11.4□□□□□ -0.58
SNHG1-224ENST00000545688 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
SNHG1-224ENST00000545688 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
SNHG1-224ENST00000545688 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNHG1-224ENST00000545688 ATP1B4Q9UN42 357 aaPredicted RBP11.39□□□□□ -0.59
SNHG1-224ENST00000545688 J3QL48 77 aa11.38□□□□□ -0.59
SNHG1-224ENST00000545688 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
SNHG1-224ENST00000545688 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-224ENST00000545688 ZNF511Q8NB15 262 aa11.38□□□□□ -0.59
SNHG1-224ENST00000545688 AVPP01185 164 aa11.37□□□□□ -0.59
SNHG1-224ENST00000545688 SIAH2O43255 324 aa11.35□□□□□ -0.59
SNHG1-224ENST00000545688 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
SNHG1-224ENST00000545688 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
SNHG1-224ENST00000545688 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
SNHG1-224ENST00000545688 ALDH1A1P00352 501 aa11.33□□□□□ -0.6
SNHG1-224ENST00000545688 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.6
SNHG1-224ENST00000545688 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
SNHG1-224ENST00000545688 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
SNHG1-224ENST00000545688 AXIN1O15169 862 aa11.31□□□□□ -0.6
SNHG1-224ENST00000545688 ZNF787Q6DD87 383 aa11.31□□□□□ -0.6
SNHG1-224ENST00000545688 HPS1Q92902 700 aa11.31□□□□□ -0.6
SNHG1-224ENST00000545688 VARSP26640 1264 aaKnown RBP11.3□□□□□ -0.6
SNHG1-224ENST00000545688 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
SNHG1-224ENST00000545688 LRRN4Q8WUT4 740 aa11.3□□□□□ -0.6
SNHG1-224ENST00000545688 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
SNHG1-224ENST00000545688 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
SNHG1-224ENST00000545688 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
SNHG1-224ENST00000545688 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
SNHG1-224ENST00000545688 AP1G2O75843 785 aa11.28□□□□□ -0.6
SNHG1-224ENST00000545688 POTECB2RU33 542 aa11.27□□□□□ -0.61
SNHG1-224ENST00000545688 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
SNHG1-224ENST00000545688 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
SNHG1-224ENST00000545688 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
SNHG1-224ENST00000545688 WASF2Q9Y6W5 498 aa11.26□□□□□ -0.61
SNHG1-224ENST00000545688 RFC5P40937 340 aa11.25□□□□□ -0.61
SNHG1-224ENST00000545688 AGERQ15109 404 aa11.25□□□□□ -0.61
SNHG1-224ENST00000545688 FAM174AQ8TBP5 190 aa11.25□□□□□ -0.61
SNHG1-224ENST00000545688 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
SNHG1-224ENST00000545688 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
SNHG1-224ENST00000545688 NR6A1Q15406 480 aa11.23□□□□□ -0.61
SNHG1-224ENST00000545688 BPHLQ86WA6 291 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-224ENST00000545688 MPNDQ8N594 471 aa11.23□□□□□ -0.61
SNHG1-224ENST00000545688 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
SNHG1-224ENST00000545688 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
SNHG1-224ENST00000545688 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
SNHG1-224ENST00000545688 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.622e-31■■■□□ 17.2
SNHG1-224ENST00000545688 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
SNHG1-224ENST00000545688 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
SNHG1-224ENST00000545688 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
SNHG1-224ENST00000545688 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
SNHG1-224ENST00000545688 EPS8L1Q8TE68 723 aa11.19□□□□□ -0.62
SNHG1-224ENST00000545688 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
SNHG1-224ENST00000545688 C1QTNF2Q9BXJ5 285 aa11.19□□□□□ -0.62
SNHG1-224ENST00000545688 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
SNHG1-224ENST00000545688 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
SNHG1-224ENST00000545688 ADH1CP00326 375 aa11.18□□□□□ -0.62
SNHG1-224ENST00000545688 NNTQ13423 1086 aa11.18□□□□□ -0.62
SNHG1-224ENST00000545688 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
SNHG1-224ENST00000545688 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
SNHG1-224ENST00000545688 TMEM259Q4ZIN3 620 aa11.15□□□□□ -0.62
SNHG1-224ENST00000545688 PDXDC2PQ6P474 469 aa11.15□□□□□ -0.62
SNHG1-224ENST00000545688 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
SNHG1-224ENST00000545688 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
SNHG1-224ENST00000545688 GRM5P41594 1212 aa11.13□□□□□ -0.63
SNHG1-224ENST00000545688 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
SNHG1-224ENST00000545688 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
SNHG1-224ENST00000545688 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
SNHG1-224ENST00000545688 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
SNHG1-224ENST00000545688 NR3C2P08235 984 aa11.12□□□□□ -0.63
SNHG1-224ENST00000545688 BMP1P13497 986 aa11.12□□□□□ -0.63
SNHG1-224ENST00000545688 TIMP2P16035 220 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
SNHG1-224ENST00000545688 NR5A1Q13285 461 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 MAP4K5Q9Y4K4 846 aa11.11□□□□□ -0.63
SNHG1-224ENST00000545688 FSHRP23945 695 aa11.1□□□□□ -0.63
SNHG1-224ENST00000545688 VASH1Q7L8A9 365 aaPredicted RBP11.1□□□□□ -0.63
SNHG1-224ENST00000545688 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
SNHG1-224ENST00000545688 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
SNHG1-224ENST00000545688 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
SNHG1-224ENST00000545688 PTK2Q05397 1052 aa11.08□□□□□ -0.64
SNHG1-224ENST00000545688 ZBTB33Q86T24 672 aa11.08□□□□□ -0.64
SNHG1-224ENST00000545688 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
SNHG1-224ENST00000545688 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
SNHG1-224ENST00000545688 ZIC2O95409 532 aaPredicted RBP11.07□□□□□ -0.64
SNHG1-224ENST00000545688 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
SNHG1-224ENST00000545688 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
SNHG1-224ENST00000545688 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
SNHG1-224ENST00000545688 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
SNHG1-224ENST00000545688 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
SNHG1-224ENST00000545688 ADAM32Q8TC27 787 aa11.05□□□□□ -0.64
SNHG1-224ENST00000545688 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
SNHG1-224ENST00000545688 MRPL14Q6P1L8 145 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms