RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ERICH4A6NGS2 130 aa18.42■□□□□ 0.54
CHD4-210ENST00000544040 KIAA0754O94854 1291 aa18.42■□□□□ 0.54
CHD4-210ENST00000544040 GOLGA6L10A6NI86 522 aa18.42■□□□□ 0.54
CHD4-210ENST00000544040 SURF6O75683 361 aaKnown RBP18.42■□□□□ 0.54
CHD4-210ENST00000544040 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
CHD4-210ENST00000544040 CCDC18Q5T9S5 1454 aa18.41■□□□□ 0.54
CHD4-210ENST00000544040 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
CHD4-210ENST00000544040 TAX1BP1Q86VP1 789 aa18.41■□□□□ 0.54
CHD4-210ENST00000544040 CCDC181Q5TID7 509 aa18.41■□□□□ 0.54
CHD4-210ENST00000544040 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
CHD4-210ENST00000544040 SEPT7Q16181 437 aaKnown RBP18.4■□□□□ 0.54
CHD4-210ENST00000544040 SART3Q15020 963 aaKnown RBP18.4■□□□□ 0.54
CHD4-210ENST00000544040 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
CHD4-210ENST00000544040 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
CHD4-210ENST00000544040 ZNF396Q96N95 335 aaPredicted RBP18.4■□□□□ 0.54
CHD4-210ENST00000544040 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
CHD4-210ENST00000544040 ERLIN2O94905 339 aa18.39■□□□□ 0.54
CHD4-210ENST00000544040 DEF6Q9H4E7 631 aa18.39■□□□□ 0.54
CHD4-210ENST00000544040 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.53
CHD4-210ENST00000544040 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
CHD4-210ENST00000544040 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
CHD4-210ENST00000544040 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
CHD4-210ENST00000544040 ZNHIT6Q9NWK9 470 aaKnown RBP18.38■□□□□ 0.53
CHD4-210ENST00000544040 TXLNAP40222 546 aa18.38■□□□□ 0.53
CHD4-210ENST00000544040 PPFIBP1Q86W92 1011 aa18.38■□□□□ 0.53
CHD4-210ENST00000544040 ZHX3Q9H4I2 956 aa18.38■□□□□ 0.53
CHD4-210ENST00000544040 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
CHD4-210ENST00000544040 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
CHD4-210ENST00000544040 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
CHD4-210ENST00000544040 ZRSR2Q15696 482 aaKnown RBP18.37■□□□□ 0.53
CHD4-210ENST00000544040 CCDC192P0DO97 292 aa18.36■□□□□ 0.53
CHD4-210ENST00000544040 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
CHD4-210ENST00000544040 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
CHD4-210ENST00000544040 GRPEL1Q9HAV7 217 aa18.36■□□□□ 0.53
CHD4-210ENST00000544040 MEX3CQ5U5Q3 659 aaKnown RBP18.36■□□□□ 0.53
CHD4-210ENST00000544040 ME1P48163 572 aa18.35■□□□□ 0.53
CHD4-210ENST00000544040 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
CHD4-210ENST00000544040 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
CHD4-210ENST00000544040 RABEP1Q15276 862 aa18.35■□□□□ 0.53
CHD4-210ENST00000544040 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
CHD4-210ENST00000544040 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
CHD4-210ENST00000544040 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
CHD4-210ENST00000544040 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.53
CHD4-210ENST00000544040 SEPT11Q9NVA2 429 aaKnown RBP18.33■□□□□ 0.53
CHD4-210ENST00000544040 PDCP20941 246 aa18.33■□□□□ 0.52
CHD4-210ENST00000544040 CCDC102AQ96A19 550 aa18.33■□□□□ 0.52
CHD4-210ENST00000544040 NLRP2Q9NX02 1062 aa18.33■□□□□ 0.52
CHD4-210ENST00000544040 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
CHD4-210ENST00000544040 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
CHD4-210ENST00000544040 GOLGA6L7A0A1B0GV03 622 aa18.32■□□□□ 0.52
CHD4-210ENST00000544040 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
CHD4-210ENST00000544040 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
CHD4-210ENST00000544040 SIL1Q9H173 461 aa18.31■□□□□ 0.52
CHD4-210ENST00000544040 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
CHD4-210ENST00000544040 MCM2P49736 904 aa18.31■□□□□ 0.52
CHD4-210ENST00000544040 ERLIN1O75477 346 aa18.31■□□□□ 0.52
CHD4-210ENST00000544040 WWC2Q6AWC2 1192 aa18.31■□□□□ 0.52
CHD4-210ENST00000544040 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
CHD4-210ENST00000544040 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
CHD4-210ENST00000544040 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
CHD4-210ENST00000544040 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
CHD4-210ENST00000544040 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
CHD4-210ENST00000544040 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
CHD4-210ENST00000544040 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
CHD4-210ENST00000544040 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
CHD4-210ENST00000544040 GNAI3P08754 354 aa18.29■□□□□ 0.52
CHD4-210ENST00000544040 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
CHD4-210ENST00000544040 BCAR3O75815 825 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 HIP1O00291 1037 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
CHD4-210ENST00000544040 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 MTHFSP49914 203 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 FILIP1Q7Z7B0 1213 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
CHD4-210ENST00000544040 AAMPQ13685 434 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 DACH1Q9UI36 760 aa18.28■□□□□ 0.52
CHD4-210ENST00000544040 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
CHD4-210ENST00000544040 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
CHD4-210ENST00000544040 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
CHD4-210ENST00000544040 STIM1Q13586 685 aa18.27■□□□□ 0.51
CHD4-210ENST00000544040 JMYQ8N9B5 988 aa18.27■□□□□ 0.51
CHD4-210ENST00000544040 CCDC69A6NI79 296 aa18.26■□□□□ 0.51
CHD4-210ENST00000544040 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
CHD4-210ENST00000544040 GNAI2P04899 355 aa18.26■□□□□ 0.51
CHD4-210ENST00000544040 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
CHD4-210ENST00000544040 KRT85P78386 507 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 CCDC158Q5M9N0 1113 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 SPATA32Q96LK8 384 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
CHD4-210ENST00000544040 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
CHD4-210ENST00000544040 CBFA2T2O43439 604 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
CHD4-210ENST00000544040 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
CHD4-210ENST00000544040 CAMK4Q16566 473 aa18.24■□□□□ 0.51
CHD4-210ENST00000544040 TMEM132EQ6IEE7 984 aa18.24■□□□□ 0.51
CHD4-210ENST00000544040 SSBP05455 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHD4-210ENST00000544040 GCC1Q96CN9 775 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms