RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 GPRASP1Q5JY77 1395 aa17.43■□□□□ 0.38
GABPB1-206ENST00000543881 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
GABPB1-206ENST00000543881 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
GABPB1-206ENST00000543881 DISP2A7MBM2 1401 aa17.4■□□□□ 0.38
GABPB1-206ENST00000543881 TNS1Q9HBL0 1735 aaKnown RBP17.4■□□□□ 0.38
GABPB1-206ENST00000543881 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
GABPB1-206ENST00000543881 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
GABPB1-206ENST00000543881 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.37
GABPB1-206ENST00000543881 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
GABPB1-206ENST00000543881 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
GABPB1-206ENST00000543881 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
GABPB1-206ENST00000543881 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
GABPB1-206ENST00000543881 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
GABPB1-206ENST00000543881 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
GABPB1-206ENST00000543881 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
GABPB1-206ENST00000543881 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
GABPB1-206ENST00000543881 TULP4Q9NRJ4 1543 aa17.37■□□□□ 0.37
GABPB1-206ENST00000543881 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
GABPB1-206ENST00000543881 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
GABPB1-206ENST00000543881 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
GABPB1-206ENST00000543881 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
GABPB1-206ENST00000543881 TRIM37O94972 964 aa17.35■□□□□ 0.37
GABPB1-206ENST00000543881 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
GABPB1-206ENST00000543881 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
GABPB1-206ENST00000543881 STRN4Q9NRL3 753 aa17.33■□□□□ 0.37
GABPB1-206ENST00000543881 KIAA0232Q92628 1395 aa17.33■□□□□ 0.36
GABPB1-206ENST00000543881 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
GABPB1-206ENST00000543881 APBA3O96018 575 aa17.31■□□□□ 0.36
GABPB1-206ENST00000543881 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
GABPB1-206ENST00000543881 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
GABPB1-206ENST00000543881 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
GABPB1-206ENST00000543881 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
GABPB1-206ENST00000543881 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
GABPB1-206ENST00000543881 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
GABPB1-206ENST00000543881 RREB1Q92766 1687 aa17.27■□□□□ 0.36
GABPB1-206ENST00000543881 PDE3BQ13370 1112 aa17.27■□□□□ 0.36
GABPB1-206ENST00000543881 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
GABPB1-206ENST00000543881 ATP7BP35670 1465 aa17.27■□□□□ 0.35
GABPB1-206ENST00000543881 EVA1CP58658 441 aa17.26■□□□□ 0.35
GABPB1-206ENST00000543881 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
GABPB1-206ENST00000543881 BARGINQ6ZT62 677 aa17.26■□□□□ 0.35
GABPB1-206ENST00000543881 NUP188Q5SRE5 1749 aa17.25■□□□□ 0.35
GABPB1-206ENST00000543881 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
GABPB1-206ENST00000543881 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
GABPB1-206ENST00000543881 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
GABPB1-206ENST00000543881 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
GABPB1-206ENST00000543881 YY1P25490 414 aa17.24■□□□□ 0.35
GABPB1-206ENST00000543881 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
GABPB1-206ENST00000543881 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
GABPB1-206ENST00000543881 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
GABPB1-206ENST00000543881 CDK19Q9BWU1 502 aa17.21■□□□□ 0.35
GABPB1-206ENST00000543881 ACEP12821 1306 aa17.21■□□□□ 0.35
GABPB1-206ENST00000543881 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
GABPB1-206ENST00000543881 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
GABPB1-206ENST00000543881 NBPF1Q3BBV0 1214 aa17.2■□□□□ 0.34
GABPB1-206ENST00000543881 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
GABPB1-206ENST00000543881 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 CPDO75976 1380 aa17.19■□□□□ 0.34
GABPB1-206ENST00000543881 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
GABPB1-206ENST00000543881 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
GABPB1-206ENST00000543881 USP19O94966 1318 aa17.17■□□□□ 0.34
GABPB1-206ENST00000543881 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
GABPB1-206ENST00000543881 KCNQ2O43526 872 aa17.17■□□□□ 0.34
GABPB1-206ENST00000543881 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
GABPB1-206ENST00000543881 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
GABPB1-206ENST00000543881 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
GABPB1-206ENST00000543881 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
GABPB1-206ENST00000543881 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
GABPB1-206ENST00000543881 GCP02774 474 aa17.14■□□□□ 0.33
GABPB1-206ENST00000543881 NLRP13Q86W25 1043 aa17.14■□□□□ 0.33
GABPB1-206ENST00000543881 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
GABPB1-206ENST00000543881 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
GABPB1-206ENST00000543881 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
GABPB1-206ENST00000543881 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
GABPB1-206ENST00000543881 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
GABPB1-206ENST00000543881 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
GABPB1-206ENST00000543881 CRB1P82279 1406 aa17.12■□□□□ 0.33
GABPB1-206ENST00000543881 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
GABPB1-206ENST00000543881 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
GABPB1-206ENST00000543881 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
GABPB1-206ENST00000543881 PLSCR1O15162 318 aa17.11■□□□□ 0.33
GABPB1-206ENST00000543881 PPIP5K1Q6PFW1 1433 aa17.09■□□□□ 0.33
GABPB1-206ENST00000543881 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
GABPB1-206ENST00000543881 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
GABPB1-206ENST00000543881 LRRC37A3O60309 1634 aa17.08■□□□□ 0.33
GABPB1-206ENST00000543881 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
GABPB1-206ENST00000543881 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
GABPB1-206ENST00000543881 DDB1Q16531 1140 aa17.08■□□□□ 0.32
GABPB1-206ENST00000543881 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-206ENST00000543881 CASZ1Q86V15 1759 aa17.08■□□□□ 0.32
GABPB1-206ENST00000543881 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
GABPB1-206ENST00000543881 PTF1AQ7RTS3 328 aa17.06■□□□□ 0.32
GABPB1-206ENST00000543881 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
GABPB1-206ENST00000543881 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
GABPB1-206ENST00000543881 NLRP6P59044 892 aa17.05■□□□□ 0.32
GABPB1-206ENST00000543881 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms