RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
GTF2H3-213ENST00000543415 MYSM1Q5VVJ2 828 aa7.27□□□□□ -1.25
GTF2H3-213ENST00000543415 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
GTF2H3-213ENST00000543415 SPTLC1O15269 473 aa7.26□□□□□ -1.25
GTF2H3-213ENST00000543415 HOMEZQ8IX15 550 aa7.26□□□□□ -1.25
GTF2H3-213ENST00000543415 PCDHB15Q9Y5E8 787 aa7.26□□□□□ -1.25
GTF2H3-213ENST00000543415 PLEKHG3A1L390 1219 aa7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 VARSP26640 1264 aaKnown RBP7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 PRPF38BQ5VTL8 546 aaKnown RBP7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 C14orf37Q86TY3 774 aa7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 FAM117AQ9C073 453 aa7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 LIMD1Q9UGP4 676 aa7.25□□□□□ -1.25
GTF2H3-213ENST00000543415 SNRPBP14678 240 aaKnown RBP7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 LYPD8Q6UX82 237 aa7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 MPNDQ8N594 471 aa7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 BAP1Q92560 729 aa7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
GTF2H3-213ENST00000543415 CAPN5O15484 640 aaPredicted RBP7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 CTHP32929 405 aa7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 NFX1Q12986 1120 aaKnown RBP7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 LINC01559Q495D7 138 aa7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 RIC3Q7Z5B4 369 aa7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 CABLES1Q8TDN4 633 aa7.23□□□□□ -1.25
GTF2H3-213ENST00000543415 HRCP23327 699 aa7.22□□□□□ -1.25
GTF2H3-213ENST00000543415 QPCTQ16769 361 aa7.22□□□□□ -1.25
GTF2H3-213ENST00000543415 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
GTF2H3-213ENST00000543415 TERTO14746 1132 aaKnown RBP7.21□□□□□ -1.26
GTF2H3-213ENST00000543415 CFAP99D6REC4 459 aa7.2□□□□□ -1.26
GTF2H3-213ENST00000543415 TUSC1Q2TAM9 212 aa7.2□□□□□ -1.26
GTF2H3-213ENST00000543415 FAM174AQ8TBP5 190 aa7.2□□□□□ -1.26
GTF2H3-213ENST00000543415 POLR3EQ9NVU0 708 aa7.2□□□□□ -1.26
GTF2H3-213ENST00000543415 WIPF1O43516 503 aa7.19□□□□□ -1.26
GTF2H3-213ENST00000543415 CLK2P49760 499 aaKnown RBP7.19□□□□□ -1.26
GTF2H3-213ENST00000543415 FBXO31Q5XUX0 539 aaPredicted RBP7.19□□□□□ -1.26
GTF2H3-213ENST00000543415 TLL2Q9Y6L7 1015 aa7.19□□□□□ -1.26
GTF2H3-213ENST00000543415 F12P00748 615 aaPredicted RBP7.18□□□□□ -1.26
GTF2H3-213ENST00000543415 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
GTF2H3-213ENST00000543415 SLC16A10Q8TF71 515 aa7.18□□□□□ -1.26
GTF2H3-213ENST00000543415 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
GTF2H3-213ENST00000543415 NUTM2BA6NNL0 878 aaPredicted RBP7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 NUTM2EB1AL46 878 aaPredicted RBP7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 LILRB3O75022 631 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 BMP1P13497 986 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 NNTQ13423 1086 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 NUTM2DQ5VT03 806 aaPredicted RBP7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 TRIM46Q7Z4K8 759 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 NUTM2AQ8IVF1 878 aaPredicted RBP7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
GTF2H3-213ENST00000543415 ADH1CP00326 375 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 SH3D19Q5HYK7 790 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 RTL5Q5HYW3 569 aaPredicted RBP7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 NPAS3Q8IXF0 933 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 PROCA1Q8NCQ7 364 aaPredicted RBP7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 CDK15Q96Q40 435 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 MAP10Q9P2G4 905 aa7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
GTF2H3-213ENST00000543415 RANGAP1P46060 587 aaPredicted RBP7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 AGERQ15109 404 aa7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 SKIV2LQ15477 1246 aaKnown RBP7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 BPHLQ86WA6 291 aaPredicted RBP7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 HELBQ8NG08 1087 aaPredicted RBP7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 STK17AQ9UEE5 414 aa7.15□□□□□ -1.26
GTF2H3-213ENST00000543415 PER1O15534 1290 aaPredicted RBP7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 WDR4P57081 412 aaKnown RBP7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 SCARF1Q14162 830 aa7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 TSC1Q92574 1164 aa7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.14□□□□□ -1.27
GTF2H3-213ENST00000543415 TIMP2P16035 220 aa7.13□□□□□ -1.27
GTF2H3-213ENST00000543415 NR5A1Q13285 461 aa7.13□□□□□ -1.27
GTF2H3-213ENST00000543415 NBPF14Q5TI25 921 aa7.13□□□□□ -1.27
GTF2H3-213ENST00000543415 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
GTF2H3-213ENST00000543415 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
GTF2H3-213ENST00000543415 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
GTF2H3-213ENST00000543415 KLF16Q9BXK1 252 aaPredicted RBP7.12□□□□□ -1.27
GTF2H3-213ENST00000543415 IRF7Q92985 503 aa7.11□□□□□ -1.27
GTF2H3-213ENST00000543415 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.27
GTF2H3-213ENST00000543415 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
GTF2H3-213ENST00000543415 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
GTF2H3-213ENST00000543415 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
GTF2H3-213ENST00000543415 H3BM21 787 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 GRM5P41594 1212 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 CTDSPL2Q05D32 466 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 PPP2R2DQ66LE6 453 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 SH3RF1Q7Z6J0 888 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 C1QTNF2Q9BXJ5 285 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
GTF2H3-213ENST00000543415 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 UPP2O95045 317 aa7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 SH3BP5LQ7L8J4 393 aa7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 TRMT44Q8IYL2 757 aaKnown RBP7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 GOPCQ9HD26 462 aa7.07□□□□□ -1.28
GTF2H3-213ENST00000543415 NR3C2P08235 984 aa7.06□□□□□ -1.28
GTF2H3-213ENST00000543415 VASH1Q7L8A9 365 aaPredicted RBP7.06□□□□□ -1.28
GTF2H3-213ENST00000543415 LRRN4Q8WUT4 740 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms