RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CAMKK2Q96RR4 588 aa14.79□□□□□ -0.04
CLSTN3-203ENST00000534830 APBA3O96018 575 aa14.78□□□□□ -0.04
CLSTN3-203ENST00000534830 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
CLSTN3-203ENST00000534830 SPATA31A5Q5VU36 1347 aa14.77□□□□□ -0.04
CLSTN3-203ENST00000534830 SPATA31A7Q8IWB4 1347 aa14.77□□□□□ -0.04
CLSTN3-203ENST00000534830 FAM196AQ6ZSG2 479 aa14.76□□□□□ -0.05
CLSTN3-203ENST00000534830 COL14A1Q05707 1796 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-203ENST00000534830 NBPF8Q3BBV2 869 aa14.75□□□□□ -0.05
CLSTN3-203ENST00000534830 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
CLSTN3-203ENST00000534830 PMFBP1Q8TBY8 1022 aa14.75□□□□□ -0.05
CLSTN3-203ENST00000534830 DCAF11Q8TEB1 546 aa14.75□□□□□ -0.05
CLSTN3-203ENST00000534830 PARD3Q8TEW0 1356 aa14.74□□□□□ -0.05
CLSTN3-203ENST00000534830 PRAM1Q96QH2 718 aa14.74□□□□□ -0.05
CLSTN3-203ENST00000534830 SPON1Q9HCB6 807 aa14.74□□□□□ -0.05
CLSTN3-203ENST00000534830 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
CLSTN3-203ENST00000534830 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLSTN3-203ENST00000534830 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
CLSTN3-203ENST00000534830 KCNQ2O43526 872 aa14.71□□□□□ -0.05
CLSTN3-203ENST00000534830 PRDM11Q9NQV5 511 aa14.71□□□□□ -0.05
CLSTN3-203ENST00000534830 NINLQ9Y2I6 1382 aa14.71□□□□□ -0.06
CLSTN3-203ENST00000534830 TRAK1Q9UPV9 953 aa14.7□□□□□ -0.06
CLSTN3-203ENST00000534830 NUP188Q5SRE5 1749 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 ARHGEF28Q8N1W1 1705 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 ANKARQ7Z5J8 1434 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 RREB1Q92766 1687 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 STRN4Q9NRL3 753 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 POGKQ9P215 609 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 KIAA1210Q9ULL0 1709 aa14.69□□□□□ -0.06
CLSTN3-203ENST00000534830 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 TRPM3Q9HCF6 1732 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 GPRASP1Q5JY77 1395 aa14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
CLSTN3-203ENST00000534830 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-203ENST00000534830 ZNF784Q8NCA9 323 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-203ENST00000534830 ALS2Q96Q42 1657 aa14.67□□□□□ -0.06
CLSTN3-203ENST00000534830 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
CLSTN3-203ENST00000534830 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-203ENST00000534830 TULP4Q9NRJ4 1543 aa14.65□□□□□ -0.06
CLSTN3-203ENST00000534830 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
CLSTN3-203ENST00000534830 HIRIP3Q9BW71 556 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-203ENST00000534830 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-203ENST00000534830 KIAA0232Q92628 1395 aa14.63□□□□□ -0.07
CLSTN3-203ENST00000534830 EVA1CP58658 441 aa14.63□□□□□ -0.07
CLSTN3-203ENST00000534830 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
CLSTN3-203ENST00000534830 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
CLSTN3-203ENST00000534830 CRYBG1Q9Y4K1 1723 aa14.62□□□□□ -0.07
CLSTN3-203ENST00000534830 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
CLSTN3-203ENST00000534830 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
CLSTN3-203ENST00000534830 NBPF1Q3BBV0 1214 aa14.6□□□□□ -0.07
CLSTN3-203ENST00000534830 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
CLSTN3-203ENST00000534830 ITSN1Q15811 1721 aa14.6□□□□□ -0.07
CLSTN3-203ENST00000534830 UTRNP46939 3433 aa14.59□□□□□ -0.07
CLSTN3-203ENST00000534830 ATP7BP35670 1465 aa14.59□□□□□ -0.07
CLSTN3-203ENST00000534830 NRKQ7Z2Y5 1582 aa14.59□□□□□ -0.07
CLSTN3-203ENST00000534830 TOPAZ1Q8N9V7 1692 aa14.58□□□□□ -0.08
CLSTN3-203ENST00000534830 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
CLSTN3-203ENST00000534830 ZBTB7AO95365 584 aa14.57□□□□□ -0.08
CLSTN3-203ENST00000534830 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
CLSTN3-203ENST00000534830 LARP1Q6PKG0 1096 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-203ENST00000534830 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
CLSTN3-203ENST00000534830 NUDT16Q96DE0 195 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-203ENST00000534830 L3MBTL2Q969R5 705 aa14.56□□□□□ -0.08
CLSTN3-203ENST00000534830 CDK19Q9BWU1 502 aa14.56□□□□□ -0.08
CLSTN3-203ENST00000534830 PDGFDQ9GZP0 370 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-203ENST00000534830 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-203ENST00000534830 CHD4Q14839 1912 aa14.56□□□□□ -0.08
CLSTN3-203ENST00000534830 SIN3AQ96ST3 1273 aa14.55□□□□□ -0.08
CLSTN3-203ENST00000534830 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
CLSTN3-203ENST00000534830 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
CLSTN3-203ENST00000534830 MYOM1P52179 1685 aa14.55□□□□□ -0.08
CLSTN3-203ENST00000534830 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-203ENST00000534830 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-203ENST00000534830 CASZ1Q86V15 1759 aa14.54□□□□□ -0.08
CLSTN3-203ENST00000534830 TRPM1Q7Z4N2 1603 aa14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 PLSCR1O15162 318 aa14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 FHDC1Q9C0D6 1143 aaPredicted RBP14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 THRAP3Q9Y2W1 955 aaKnown RBP14.53□□□□□ -0.08
CLSTN3-203ENST00000534830 PTGER2P43116 358 aa14.52□□□□□ -0.09
CLSTN3-203ENST00000534830 SYT17Q9BSW7 474 aa14.52□□□□□ -0.09
CLSTN3-203ENST00000534830 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
CLSTN3-203ENST00000534830 QRICH2Q9H0J4 1663 aa14.51□□□□□ -0.09
CLSTN3-203ENST00000534830 OVOS2A0A0G2JMS6 1433 aa14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 OVOS2A0A0J9YW53 1432 aa14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 OVOS2Q6IE36 1432 aa14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 ACEP12821 1306 aa14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 CENPJQ9HC77 1338 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-203ENST00000534830 PARP4Q9UKK3 1724 aaKnown RBP14.49□□□□□ -0.09
CLSTN3-203ENST00000534830 PTF1AQ7RTS3 328 aa14.49□□□□□ -0.09
CLSTN3-203ENST00000534830 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
CLSTN3-203ENST00000534830 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
CLSTN3-203ENST00000534830 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
CLSTN3-203ENST00000534830 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-203ENST00000534830 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms