RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
RPS3-219ENST00000534440 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
RPS3-219ENST00000534440 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
RPS3-219ENST00000534440 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
RPS3-219ENST00000534440 AHDC1Q5TGY3 1603 aaPredicted RBP13.73□□□□□ -0.21
RPS3-219ENST00000534440 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
RPS3-219ENST00000534440 KNSTRNQ9Y448 316 aa13.73□□□□□ -0.21
RPS3-219ENST00000534440 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
RPS3-219ENST00000534440 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
RPS3-219ENST00000534440 DCCP43146 1447 aa13.72□□□□□ -0.21
RPS3-219ENST00000534440 PHLPP1O60346 1717 aa13.71□□□□□ -0.21
RPS3-219ENST00000534440 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.21
RPS3-219ENST00000534440 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
RPS3-219ENST00000534440 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
RPS3-219ENST00000534440 RALBP1Q15311 655 aa13.7□□□□□ -0.22
RPS3-219ENST00000534440 MYBBP1AQ9BQG0 1328 aaKnown RBP13.69□□□□□ -0.22
RPS3-219ENST00000534440 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
RPS3-219ENST00000534440 MST1RQ04912 1400 aa13.69□□□□□ -0.22
RPS3-219ENST00000534440 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
RPS3-219ENST00000534440 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
RPS3-219ENST00000534440 MEX3CQ5U5Q3 659 aaKnown RBP13.67□□□□□ -0.22
RPS3-219ENST00000534440 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
RPS3-219ENST00000534440 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
RPS3-219ENST00000534440 NSD2O96028 1365 aa13.67□□□□□ -0.22
RPS3-219ENST00000534440 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
RPS3-219ENST00000534440 USP6P35125 1406 aa13.66□□□□□ -0.22
RPS3-219ENST00000534440 RXRBP28702 533 aa13.66□□□□□ -0.22
RPS3-219ENST00000534440 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
RPS3-219ENST00000534440 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
RPS3-219ENST00000534440 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
RPS3-219ENST00000534440 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
RPS3-219ENST00000534440 ACEP12821 1306 aa13.64□□□□□ -0.23
RPS3-219ENST00000534440 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
RPS3-219ENST00000534440 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
RPS3-219ENST00000534440 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
RPS3-219ENST00000534440 AFF2P51816 1311 aa13.64□□□□□ -0.23
RPS3-219ENST00000534440 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 FYB1O15117 783 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
RPS3-219ENST00000534440 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
RPS3-219ENST00000534440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPS3-219ENST00000534440 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
RPS3-219ENST00000534440 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
RPS3-219ENST00000534440 NME9Q86XW9 330 aa13.61□□□□□ -0.23
RPS3-219ENST00000534440 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
RPS3-219ENST00000534440 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
RPS3-219ENST00000534440 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
RPS3-219ENST00000534440 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
RPS3-219ENST00000534440 TTC21BQ7Z4L5 1316 aa13.6□□□□□ -0.23
RPS3-219ENST00000534440 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
RPS3-219ENST00000534440 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
RPS3-219ENST00000534440 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
RPS3-219ENST00000534440 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
RPS3-219ENST00000534440 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
RPS3-219ENST00000534440 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
RPS3-219ENST00000534440 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
RPS3-219ENST00000534440 RBM6P78332 1123 aaKnown RBP13.58□□□□□ -0.24
RPS3-219ENST00000534440 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
RPS3-219ENST00000534440 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
RPS3-219ENST00000534440 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
RPS3-219ENST00000534440 RGS12O14924 1447 aa13.57□□□□□ -0.24
RPS3-219ENST00000534440 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
RPS3-219ENST00000534440 ESCO1Q5FWF5 840 aa13.57□□□□□ -0.24
RPS3-219ENST00000534440 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
RPS3-219ENST00000534440 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
RPS3-219ENST00000534440 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
RPS3-219ENST00000534440 FNBP4Q8N3X1 1017 aaPredicted RBP13.55□□□□□ -0.24
RPS3-219ENST00000534440 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
RPS3-219ENST00000534440 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
RPS3-219ENST00000534440 USP31Q70CQ4 1352 aa13.54□□□□□ -0.24
RPS3-219ENST00000534440 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
RPS3-219ENST00000534440 FBLN1P23142 703 aa13.53□□□□□ -0.24
RPS3-219ENST00000534440 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
RPS3-219ENST00000534440 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
RPS3-219ENST00000534440 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
RPS3-219ENST00000534440 FOXO3O43524 673 aa13.52□□□□□ -0.25
RPS3-219ENST00000534440 MTHFSP49914 203 aa13.52□□□□□ -0.25
RPS3-219ENST00000534440 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
RPS3-219ENST00000534440 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
RPS3-219ENST00000534440 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
RPS3-219ENST00000534440 PXDNQ92626 1479 aa13.52□□□□□ -0.25
RPS3-219ENST00000534440 EP400Q96L91 3159 aa13.51□□□□□ -0.25
RPS3-219ENST00000534440 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
RPS3-219ENST00000534440 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
RPS3-219ENST00000534440 COG3Q96JB2 828 aa13.51□□□□□ -0.25
RPS3-219ENST00000534440 NFAT5O94916 1531 aa13.49□□□□□ -0.25
RPS3-219ENST00000534440 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
RPS3-219ENST00000534440 USP21Q9UK80 565 aa13.49□□□□□ -0.25
RPS3-219ENST00000534440 SLIT3O75094 1523 aa13.49□□□□□ -0.25
RPS3-219ENST00000534440 ATRNO75882 1429 aa13.48□□□□□ -0.25
RPS3-219ENST00000534440 PSME1Q06323 249 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms