RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
RDX-215ENST00000533961 ZNF511Q8NB15 262 aa8.66□□□□□ -1.02
RDX-215ENST00000533961 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
RDX-215ENST00000533961 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
RDX-215ENST00000533961 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
RDX-215ENST00000533961 IRF6O14896 467 aa8.64□□□□□ -1.03
RDX-215ENST00000533961 PPFIA3O75145 1194 aa8.64□□□□□ -1.03
RDX-215ENST00000533961 FDX1P10109 184 aa8.64□□□□□ -1.03
RDX-215ENST00000533961 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
RDX-215ENST00000533961 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
RDX-215ENST00000533961 CLCN1P35523 988 aa8.62□□□□□ -1.03
RDX-215ENST00000533961 GPCPD1Q9NPB8 672 aa8.62□□□□□ -1.03
RDX-215ENST00000533961 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
RDX-215ENST00000533961 UPP2O95045 317 aa8.61□□□□□ -1.03
RDX-215ENST00000533961 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
RDX-215ENST00000533961 PCDHGC3Q9UN70 934 aa8.61□□□□□ -1.03
RDX-215ENST00000533961 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
RDX-215ENST00000533961 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
RDX-215ENST00000533961 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
RDX-215ENST00000533961 CDK15Q96Q40 435 aa8.59□□□□□ -1.03
RDX-215ENST00000533961 BMP2P12643 396 aa8.58□□□□□ -1.04
RDX-215ENST00000533961 NR5A1Q13285 461 aa8.58□□□□□ -1.04
RDX-215ENST00000533961 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
RDX-215ENST00000533961 KRI1Q8N9T8 703 aaKnown RBP8.58□□□□□ -1.04
RDX-215ENST00000533961 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
RDX-215ENST00000533961 ARID5BQ14865 1188 aa8.57□□□□□ -1.04
RDX-215ENST00000533961 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
RDX-215ENST00000533961 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
RDX-215ENST00000533961 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
RDX-215ENST00000533961 IGHA1P01876 353 aa8.56□□□□□ -1.04
RDX-215ENST00000533961 CNTNAP3BQ96NU0 1288 aa8.56□□□□□ -1.04
RDX-215ENST00000533961 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
RDX-215ENST00000533961 SPTLC1O15269 473 aa8.55□□□□□ -1.04
RDX-215ENST00000533961 CTHP32929 405 aa8.54□□□□□ -1.04
RDX-215ENST00000533961 KRT76Q01546 638 aa8.54□□□□□ -1.04
RDX-215ENST00000533961 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
RDX-215ENST00000533961 DNMT3AQ9Y6K1 912 aaPredicted RBP8.54□□□□□ -1.04
RDX-215ENST00000533961 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
RDX-215ENST00000533961 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
RDX-215ENST00000533961 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
RDX-215ENST00000533961 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
RDX-215ENST00000533961 MTMR2Q13614 643 aa8.52□□□□□ -1.05
RDX-215ENST00000533961 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.52□□□□□ -1.057e-7■□□□□ 11.3
RDX-215ENST00000533961 MEIOBQ8N635 442 aa8.52□□□□□ -1.05
RDX-215ENST00000533961 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
RDX-215ENST00000533961 NR3C2P08235 984 aa8.51□□□□□ -1.05
RDX-215ENST00000533961 FOXK2Q01167 660 aa8.51□□□□□ -1.05
RDX-215ENST00000533961 SVOPQ8N4V2 548 aa8.51□□□□□ -1.05
RDX-215ENST00000533961 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
RDX-215ENST00000533961 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
RDX-215ENST00000533961 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
RDX-215ENST00000533961 NDUFV2P19404 249 aa8.5□□□□□ -1.05
RDX-215ENST00000533961 IRS1P35568 1242 aa8.5□□□□□ -1.05
RDX-215ENST00000533961 GRM5P41594 1212 aa8.5□□□□□ -1.05
RDX-215ENST00000533961 ZNF385CQ66K41 422 aaPredicted RBP8.5□□□□□ -1.05
RDX-215ENST00000533961 TSEN34Q9BSV6 310 aaKnown RBP8.5□□□□□ -1.05
RDX-215ENST00000533961 MOXD2PA6NHM9 499 aa8.49□□□□□ -1.05
RDX-215ENST00000533961 AGERQ15109 404 aa8.49□□□□□ -1.05
RDX-215ENST00000533961 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
RDX-215ENST00000533961 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
RDX-215ENST00000533961 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
RDX-215ENST00000533961 SSTR3P32745 418 aaPredicted RBP8.48□□□□□ -1.05
RDX-215ENST00000533961 MARSP56192 900 aaKnown RBP8.48□□□□□ -1.05
RDX-215ENST00000533961 BPHLQ86WA6 291 aaPredicted RBP8.48□□□□□ -1.05
RDX-215ENST00000533961 TTLL8A6PVC2 850 aa8.47□□□□□ -1.05
RDX-215ENST00000533961 PTSQ03393 145 aa8.47□□□□□ -1.05
RDX-215ENST00000533961 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
RDX-215ENST00000533961 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
RDX-215ENST00000533961 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
RDX-215ENST00000533961 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
RDX-215ENST00000533961 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
RDX-215ENST00000533961 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
RDX-215ENST00000533961 GJA5P36382 358 aa8.43□□□□□ -1.06
RDX-215ENST00000533961 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
RDX-215ENST00000533961 RNFT1Q5M7Z0 435 aa8.43□□□□□ -1.06
RDX-215ENST00000533961 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
RDX-215ENST00000533961 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
RDX-215ENST00000533961 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
RDX-215ENST00000533961 FSHRP23945 695 aa8.41□□□□□ -1.06
RDX-215ENST00000533961 XP32Q5T750 250 aa8.41□□□□□ -1.06
RDX-215ENST00000533961 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
RDX-215ENST00000533961 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.06
RDX-215ENST00000533961 SV2AQ7L0J3 742 aa8.4□□□□□ -1.06
RDX-215ENST00000533961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.4□□□□□ -1.06
RDX-215ENST00000533961 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.06
RDX-215ENST00000533961 ARMC2Q8NEN0 867 aa8.4□□□□□ -1.06
RDX-215ENST00000533961 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
RDX-215ENST00000533961 ITGA6P23229 1130 aa8.39□□□□□ -1.07
RDX-215ENST00000533961 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
RDX-215ENST00000533961 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
RDX-215ENST00000533961 C1QTNF2Q9BXJ5 285 aa8.39□□□□□ -1.07
RDX-215ENST00000533961 CDC14CA4D256 554 aa8.38□□□□□ -1.07
RDX-215ENST00000533961 SLC35F4A4IF30 521 aa8.38□□□□□ -1.07
RDX-215ENST00000533961 SPINT1O43278 529 aa8.37□□□□□ -1.07
RDX-215ENST00000533961 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
RDX-215ENST00000533961 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
RDX-215ENST00000533961 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
RDX-215ENST00000533961 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
RDX-215ENST00000533961 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
RDX-215ENST00000533961 MSTNO14793 375 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms