RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 GSE1Q14687 1217 aa17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 GNAI2P04899 355 aa17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
NCAPD3-203ENST00000525964 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
NCAPD3-203ENST00000525964 CNNM1Q9NRU3 951 aa17.42■□□□□ 0.38
NCAPD3-203ENST00000525964 CCDC158Q5M9N0 1113 aa17.42■□□□□ 0.38
NCAPD3-203ENST00000525964 SLC26A8Q96RN1 970 aa17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 RTEL1-TNFRSF6BF6WH68 1400 aa17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
NCAPD3-203ENST00000525964 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 PDCP20941 246 aa17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 HOMER1Q86YM7 354 aa17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
NCAPD3-203ENST00000525964 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 SDF4Q9BRK5 362 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 ATAD2Q6PL18 1390 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 CT47B1P0C2W7 299 aaPredicted RBP17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 MCM2P49736 904 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 FOSBP53539 338 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
NCAPD3-203ENST00000525964 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.377e-7■■■□□ 18.6
NCAPD3-203ENST00000525964 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
NCAPD3-203ENST00000525964 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
NCAPD3-203ENST00000525964 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
NCAPD3-203ENST00000525964 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
NCAPD3-203ENST00000525964 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
NCAPD3-203ENST00000525964 CT47A1Q5JQC4 288 aaPredicted RBP17.37■□□□□ 0.37
NCAPD3-203ENST00000525964 ZNF592Q92610 1267 aa17.37■□□□□ 0.37
NCAPD3-203ENST00000525964 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
NCAPD3-203ENST00000525964 OFD1O75665 1012 aa17.37■□□□□ 0.37
NCAPD3-203ENST00000525964 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
NCAPD3-203ENST00000525964 TTC39AQ5SRH9 613 aa17.36■□□□□ 0.37
NCAPD3-203ENST00000525964 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
NCAPD3-203ENST00000525964 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
NCAPD3-203ENST00000525964 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
NCAPD3-203ENST00000525964 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
NCAPD3-203ENST00000525964 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
NCAPD3-203ENST00000525964 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
NCAPD3-203ENST00000525964 ODF2Q5BJF6 829 aa17.34■□□□□ 0.37
NCAPD3-203ENST00000525964 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
NCAPD3-203ENST00000525964 CDCA7LQ96GN5 454 aa17.34■□□□□ 0.37
NCAPD3-203ENST00000525964 EPS15P42566 896 aa17.34■□□□□ 0.37
NCAPD3-203ENST00000525964 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
NCAPD3-203ENST00000525964 NEK4P51957 841 aa17.33■□□□□ 0.37
NCAPD3-203ENST00000525964 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.37
NCAPD3-203ENST00000525964 TXLNAP40222 546 aa17.33■□□□□ 0.36
NCAPD3-203ENST00000525964 RRP12Q5JTH9 1297 aaKnown RBP17.33■□□□□ 0.36
NCAPD3-203ENST00000525964 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 NESP48681 1621 aa17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 NAP1L1P55209 391 aaKnown RBP17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 ERBINQ96RT1 1412 aa17.32■□□□□ 0.36
NCAPD3-203ENST00000525964 RABEP1Q15276 862 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
NCAPD3-203ENST00000525964 CDK5RAP3Q96JB5 506 aa17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 KINO60870 393 aaKnown RBP17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 FCHSD2O94868 740 aa17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
NCAPD3-203ENST00000525964 MBD3O95983 291 aa17.29■□□□□ 0.36
NCAPD3-203ENST00000525964 JMYQ8N9B5 988 aa17.29■□□□□ 0.36
NCAPD3-203ENST00000525964 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
NCAPD3-203ENST00000525964 TRIM22Q8IYM9 498 aa17.29■□□□□ 0.36
NCAPD3-203ENST00000525964 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 MYL6BP14649 208 aa17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 ANKRD1Q15327 319 aa17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 C1orf115Q9H7X2 142 aa17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 CDR1P51861 262 aa17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
NCAPD3-203ENST00000525964 CCDC173Q0VFZ6 552 aa17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 WWC2Q6AWC2 1192 aa17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 SIL1Q9H173 461 aa17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 CYP46A1Q9Y6A2 500 aa17.27■□□□□ 0.36
NCAPD3-203ENST00000525964 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.35
NCAPD3-203ENST00000525964 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
NCAPD3-203ENST00000525964 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
NCAPD3-203ENST00000525964 STK38Q15208 465 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms