RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	COL14A1	Q05707	1796 aa	Known RBP	16.21	■□□□□ 0.18
SORBS3-222	ENST00000524057	NINL	Q9Y2I6	1382 aa		16.2	■□□□□ 0.18
SORBS3-222	ENST00000524057	SAFB2	Q14151	953 aa	Known RBP eCLIP	16.19	■□□□□ 0.18
SORBS3-222	ENST00000524057	PRDM11	Q9NQV5	511 aa		16.19	■□□□□ 0.18
SORBS3-222	ENST00000524057	ADGRB2	O60241	1585 aa		16.18	■□□□□ 0.18
SORBS3-222	ENST00000524057	SENP3-EIF4A1	A0A087X0R7	540 aa		16.18	■□□□□ 0.18
SORBS3-222	ENST00000524057	PDE3B	Q13370	1112 aa		16.18	■□□□□ 0.18
SORBS3-222	ENST00000524057	KNDC1	Q76NI1	1749 aa		16.18	■□□□□ 0.18
SORBS3-222	ENST00000524057	ANKRD30B	Q9BXX2	1392 aa		16.17	■□□□□ 0.18
SORBS3-222	ENST00000524057	PRAM1	Q96QH2	718 aa		16.17	■□□□□ 0.18
SORBS3-222	ENST00000524057	C14orf93	Q9H972	538 aa	Known RBP	16.17	■□□□□ 0.18
SORBS3-222	ENST00000524057	STRN4	Q9NRL3	753 aa		16.17	■□□□□ 0.18
SORBS3-222	ENST00000524057	USP35	Q9P2H5	1018 aa		16.16	■□□□□ 0.18
SORBS3-222	ENST00000524057	RREB1	Q92766	1687 aa		16.15	■□□□□ 0.18
SORBS3-222	ENST00000524057	UTRN	P46939	3433 aa		16.15	■□□□□ 0.18
SORBS3-222	ENST00000524057	PIK3C2G	O75747	1445 aa		16.15	■□□□□ 0.18
SORBS3-222	ENST00000524057	CHRNA2	Q15822	529 aa		16.15	■□□□□ 0.18
SORBS3-222	ENST00000524057	IFT172	Q9UG01	1749 aa		16.15	■□□□□ 0.18
SORBS3-222	ENST00000524057	CAMTA1	Q9Y6Y1	1673 aa		16.14	■□□□□ 0.18
SORBS3-222	ENST00000524057	GPRASP1	Q5JY77	1395 aa		16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	NUP188	Q5SRE5	1749 aa		16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	SPATA31E1	Q6ZUB1	1445 aa		16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	C1QTNF8	P60827	252 aa		16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	BARGIN	Q6ZT62	677 aa		16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	ACIN1	Q9UKV3	1341 aa	Known RBP	16.14	■□□□□ 0.17
SORBS3-222	ENST00000524057	PAK3	O75914	559 aa	Predicted RBP	16.13	■□□□□ 0.17
SORBS3-222	ENST00000524057	CFAP70	Q5T0N1	1121 aa		16.13	■□□□□ 0.17
SORBS3-222	ENST00000524057	TRPM3	Q9HCF6	1732 aa	Predicted RBP	16.13	■□□□□ 0.17
SORBS3-222	ENST00000524057	DHX57	Q6P158	1386 aa	Known RBP	16.13	■□□□□ 0.17
SORBS3-222	ENST00000524057	KIAA0232	Q92628	1395 aa		16.13	■□□□□ 0.17
SORBS3-222	ENST00000524057	ANKAR	Q7Z5J8	1434 aa		16.12	■□□□□ 0.17
SORBS3-222	ENST00000524057	POGK	Q9P215	609 aa		16.12	■□□□□ 0.17
SORBS3-222	ENST00000524057	ALS2	Q96Q42	1657 aa		16.11	■□□□□ 0.17
SORBS3-222	ENST00000524057	EVA1C	P58658	441 aa		16.11	■□□□□ 0.17
SORBS3-222	ENST00000524057	PDGFD	Q9GZP0	370 aa	Predicted RBP	16.11	■□□□□ 0.17
SORBS3-222	ENST00000524057	PRR36	Q9H6K5	1346 aa		16.11	■□□□□ 0.17
SORBS3-222	ENST00000524057	ZC3H6	P61129	1189 aa	Known RBP	16.1	■□□□□ 0.17
SORBS3-222	ENST00000524057	HIRIP3	Q9BW71	556 aa	Predicted RBP	16.1	■□□□□ 0.17
SORBS3-222	ENST00000524057	NGDN	Q8NEJ9	315 aa	Known RBP	16.09	■□□□□ 0.17
SORBS3-222	ENST00000524057	PTGER2	P43116	358 aa		16.08	■□□□□ 0.16
SORBS3-222	ENST00000524057	LARP1	Q6PKG0	1096 aa	Known RBP	16.08	■□□□□ 0.16
SORBS3-222	ENST00000524057	PLSCR1	O15162	318 aa		16.07	■□□□□ 0.16
SORBS3-222	ENST00000524057	ZBTB7A	O95365	584 aa		16.07	■□□□□ 0.16
SORBS3-222	ENST00000524057	TCP11L2	Q8N4U5	519 aa		16.07	■□□□□ 0.16
SORBS3-222	ENST00000524057	ANO8	Q9HCE9	1232 aa	Predicted RBP	16.07	■□□□□ 0.16
SORBS3-222	ENST00000524057	CRYBG1	Q9Y4K1	1723 aa		16.06	■□□□□ 0.16
SORBS3-222	ENST00000524057	SYT17	Q9BSW7	474 aa		16.06	■□□□□ 0.16
SORBS3-222	ENST00000524057	ATF5	Q9Y2D1	282 aa	Predicted RBP	16.06	■□□□□ 0.16
SORBS3-222	ENST00000524057	NUTM2G	Q5VZR2	741 aa		16.05	■□□□□ 0.16
SORBS3-222	ENST00000524057	PROM2	Q8N271	834 aa		16.05	■□□□□ 0.16
SORBS3-222	ENST00000524057	SSH2	Q76I76	1423 aa		16.04	■□□□□ 0.16
SORBS3-222	ENST00000524057	MINK1	Q8N4C8	1332 aa	Predicted RBP	16.04	■□□□□ 0.16
SORBS3-222	ENST00000524057	WASL	O00401	505 aa	Predicted RBP	16.04	■□□□□ 0.16
SORBS3-222	ENST00000524057	FHDC1	Q9C0D6	1143 aa	Predicted RBP	16.04	■□□□□ 0.16
SORBS3-222	ENST00000524057	C11orf95	C9JLR9	678 aa	Predicted RBP	16.03	■□□□□ 0.16
SORBS3-222	ENST00000524057	PTF1A	Q7RTS3	328 aa		16.03	■□□□□ 0.16
SORBS3-222	ENST00000524057	THRAP3	Q9Y2W1	955 aa	Known RBP	16.03	■□□□□ 0.16
SORBS3-222	ENST00000524057	NRK	Q7Z2Y5	1582 aa		16.02	■□□□□ 0.16
SORBS3-222	ENST00000524057	TRAK1	Q9UPV9	953 aa		16.02	■□□□□ 0.16
SORBS3-222	ENST00000524057	MPHOSPH9	Q99550	1183 aa		16.01	■□□□□ 0.15
SORBS3-222	ENST00000524057	BCL11B	Q9C0K0	894 aa	Predicted RBP	16.01	■□□□□ 0.15
SORBS3-222	ENST00000524057	CASZ1	Q86V15	1759 aa		16	■□□□□ 0.15
SORBS3-222	ENST00000524057	DLC1	Q96QB1	1528 aa		16	■□□□□ 0.15
SORBS3-222	ENST00000524057	EIF3A	Q14152	1382 aa	Known RBP	16	■□□□□ 0.15
SORBS3-222	ENST00000524057	TULP4	Q9NRJ4	1543 aa		15.99	■□□□□ 0.15
SORBS3-222	ENST00000524057	NUDT16	Q96DE0	195 aa	Known RBP	15.98	■□□□□ 0.15
SORBS3-222	ENST00000524057	MYOM1	P52179	1685 aa		15.98	■□□□□ 0.15
SORBS3-222	ENST00000524057	SGIP1	Q9BQI5	828 aa		15.97	■□□□□ 0.15
SORBS3-222	ENST00000524057	SLC15A2	Q16348	729 aa		15.96	■□□□□ 0.15
SORBS3-222	ENST00000524057	OVOS2	A0A0G2JMS6	1433 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	OVOS2	A0A0J9YW53	1432 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	OVOS2	Q6IE36	1432 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	PHRF1	Q9P1Y6	1649 aa	Known RBP	15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	DDB1	Q16531	1140 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	ABTB2	Q8N961	1025 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	MTFR1L	Q9H019	292 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	STK32B	Q9NY57	414 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	CPD	O75976	1380 aa		15.95	■□□□□ 0.14
SORBS3-222	ENST00000524057	CEP350	Q5VT06	3117 aa		15.94	■□□□□ 0.14
SORBS3-222	ENST00000524057	CHD4	Q14839	1912 aa		15.94	■□□□□ 0.14
SORBS3-222	ENST00000524057	GIGYF1	O75420	1035 aa	Predicted RBP	15.94	■□□□□ 0.14
SORBS3-222	ENST00000524057	TXNRD1	Q16881	649 aa		15.94	■□□□□ 0.14
SORBS3-222	ENST00000524057	PEAK1	Q9H792	1746 aa		15.94	■□□□□ 0.14
SORBS3-222	ENST00000524057	PARP4	Q9UKK3	1724 aa	Known RBP	15.93	■□□□□ 0.14
SORBS3-222	ENST00000524057	ACE	P12821	1306 aa		15.93	■□□□□ 0.14
SORBS3-222	ENST00000524057	RGPD3	A6NKT7	1758 aa	Predicted RBP	15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	RGPD4	Q7Z3J3	1758 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	ADGRB1	O14514	1584 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	ATP7B	P35670	1465 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	GC	P02774	474 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	MARCH10	Q8NA82	808 aa	Predicted RBP	15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	ARX	Q96QS3	562 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	LMO7	Q8WWI1	1683 aa		15.92	■□□□□ 0.14
SORBS3-222	ENST00000524057	GPR162	Q16538	588 aa		15.91	■□□□□ 0.14
SORBS3-222	ENST00000524057	CRB1	P82279	1406 aa		15.91	■□□□□ 0.14
SORBS3-222	ENST00000524057	SBF2	Q86WG5	1849 aa		15.91	■□□□□ 0.14
SORBS3-222	ENST00000524057	COL5A2	P05997	1499 aa	Predicted RBP	15.91	■□□□□ 0.14
SORBS3-222	ENST00000524057	CDK19	Q9BWU1	502 aa		15.9	■□□□□ 0.14
SORBS3-222	ENST00000524057	USP19	O94966	1318 aa		15.9	■□□□□ 0.14
SORBS3-222	ENST00000524057	POLR3A	O14802	1390 aa	Predicted RBP	15.89	■□□□□ 0.13

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms