RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 COL14A1Q05707 1796 aaKnown RBP14.87□□□□□ -0.03
SH2D4A-202ENST00000518040 SPATA31A5Q5VU36 1347 aa14.86□□□□□ -0.03
SH2D4A-202ENST00000518040 SPATA31A7Q8IWB4 1347 aa14.86□□□□□ -0.03
SH2D4A-202ENST00000518040 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
SH2D4A-202ENST00000518040 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
SH2D4A-202ENST00000518040 NBPF14Q5TI25 921 aa14.86□□□□□ -0.03
SH2D4A-202ENST00000518040 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
SH2D4A-202ENST00000518040 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
SH2D4A-202ENST00000518040 YTHDC2Q9H6S0 1430 aaKnown RBP14.85□□□□□ -0.03
SH2D4A-202ENST00000518040 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 NINLQ9Y2I6 1382 aa14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 TMEM132EQ6IEE7 984 aa14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 PPP1R1BQ9UD71 204 aaPredicted RBP14.84□□□□□ -0.03
SH2D4A-202ENST00000518040 RGPD8O14715 1765 aaPredicted RBP14.83□□□□□ -0.04
SH2D4A-202ENST00000518040 APBA3O96018 575 aa14.83□□□□□ -0.04
SH2D4A-202ENST00000518040 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
SH2D4A-202ENST00000518040 TRIM37O94972 964 aa14.82□□□□□ -0.04
SH2D4A-202ENST00000518040 ANKARQ7Z5J8 1434 aa14.82□□□□□ -0.04
SH2D4A-202ENST00000518040 PIK3C2GO75747 1445 aa14.81□□□□□ -0.04
SH2D4A-202ENST00000518040 GPRASP1Q5JY77 1395 aa14.81□□□□□ -0.04
SH2D4A-202ENST00000518040 KCNQ2O43526 872 aa14.79□□□□□ -0.04
SH2D4A-202ENST00000518040 RGL3Q3MIN7 710 aa14.79□□□□□ -0.04
SH2D4A-202ENST00000518040 SPATA31A1Q5TZJ5 1347 aa14.79□□□□□ -0.04
SH2D4A-202ENST00000518040 DHX57Q6P158 1386 aaKnown RBP14.79□□□□□ -0.04
SH2D4A-202ENST00000518040 RREB1Q92766 1687 aa14.79□□□□□ -0.04
SH2D4A-202ENST00000518040 PMFBP1Q8TBY8 1022 aa14.78□□□□□ -0.04
SH2D4A-202ENST00000518040 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
SH2D4A-202ENST00000518040 SPATA31E1Q6ZUB1 1445 aa14.78□□□□□ -0.04
SH2D4A-202ENST00000518040 TRPM3Q9HCF6 1732 aaPredicted RBP14.77□□□□□ -0.04
SH2D4A-202ENST00000518040 EIF3AQ14152 1382 aaKnown RBP14.77□□□□□ -0.04
SH2D4A-202ENST00000518040 ALS2Q96Q42 1657 aa14.77□□□□□ -0.05
SH2D4A-202ENST00000518040 C11orf95C9JLR9 678 aaPredicted RBP14.77□□□□□ -0.05
SH2D4A-202ENST00000518040 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
SH2D4A-202ENST00000518040 C14orf93Q9H972 538 aaKnown RBP14.77□□□□□ -0.05
SH2D4A-202ENST00000518040 PDE3BQ13370 1112 aa14.76□□□□□ -0.05
SH2D4A-202ENST00000518040 NUP188Q5SRE5 1749 aa14.76□□□□□ -0.05
SH2D4A-202ENST00000518040 PRAM1Q96QH2 718 aa14.75□□□□□ -0.05
SH2D4A-202ENST00000518040 ACIN1Q9UKV3 1341 aaKnown RBP14.74□□□□□ -0.05
SH2D4A-202ENST00000518040 BARGINQ6ZT62 677 aa14.74□□□□□ -0.05
SH2D4A-202ENST00000518040 ZNF219Q9P2Y4 722 aaPredicted RBP14.74□□□□□ -0.05
SH2D4A-202ENST00000518040 POGKQ9P215 609 aa14.74□□□□□ -0.05
SH2D4A-202ENST00000518040 DLC1Q96QB1 1528 aa14.73□□□□□ -0.05
SH2D4A-202ENST00000518040 CRYBG1Q9Y4K1 1723 aa14.72□□□□□ -0.05
SH2D4A-202ENST00000518040 SAFB2Q14151 953 aaKnown RBP eCLIP14.71□□□□□ -0.05
SH2D4A-202ENST00000518040 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.06
SH2D4A-202ENST00000518040 ZNF784Q8NCA9 323 aaPredicted RBP14.71□□□□□ -0.06
SH2D4A-202ENST00000518040 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.06
SH2D4A-202ENST00000518040 STRN4Q9NRL3 753 aa14.71□□□□□ -0.06
SH2D4A-202ENST00000518040 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
SH2D4A-202ENST00000518040 EVA1CP58658 441 aa14.7□□□□□ -0.06
SH2D4A-202ENST00000518040 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
SH2D4A-202ENST00000518040 THRAP3Q9Y2W1 955 aaKnown RBP14.69□□□□□ -0.06
SH2D4A-202ENST00000518040 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 CFAP70Q5T0N1 1121 aa14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 TULP4Q9NRJ4 1543 aa14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 TCP11L2Q8N4U5 519 aa14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
SH2D4A-202ENST00000518040 SSH2Q76I76 1423 aa14.67□□□□□ -0.06
SH2D4A-202ENST00000518040 PLSCR1O15162 318 aa14.67□□□□□ -0.06
SH2D4A-202ENST00000518040 ATP7BP35670 1465 aa14.67□□□□□ -0.06
SH2D4A-202ENST00000518040 RGPD3A6NKT7 1758 aaPredicted RBP14.66□□□□□ -0.06
SH2D4A-202ENST00000518040 RGPD4Q7Z3J3 1758 aa14.66□□□□□ -0.06
SH2D4A-202ENST00000518040 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
SH2D4A-202ENST00000518040 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
SH2D4A-202ENST00000518040 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
SH2D4A-202ENST00000518040 C1QTNF8P60827 252 aa14.65□□□□□ -0.06
SH2D4A-202ENST00000518040 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
SH2D4A-202ENST00000518040 PHRF1Q9P1Y6 1649 aaKnown RBP14.64□□□□□ -0.07
SH2D4A-202ENST00000518040 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
SH2D4A-202ENST00000518040 HIRIP3Q9BW71 556 aaPredicted RBP14.64□□□□□ -0.07
SH2D4A-202ENST00000518040 MPHOSPH9Q99550 1183 aa14.63□□□□□ -0.07
SH2D4A-202ENST00000518040 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
SH2D4A-202ENST00000518040 OVOS2A0A0J9YW53 1432 aa14.63□□□□□ -0.07
SH2D4A-202ENST00000518040 OVOS2Q6IE36 1432 aa14.63□□□□□ -0.07
SH2D4A-202ENST00000518040 NRKQ7Z2Y5 1582 aa14.62□□□□□ -0.07
SH2D4A-202ENST00000518040 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
SH2D4A-202ENST00000518040 ITSN1Q15811 1721 aa14.62□□□□□ -0.07
SH2D4A-202ENST00000518040 PARP4Q9UKK3 1724 aaKnown RBP14.62□□□□□ -0.07
SH2D4A-202ENST00000518040 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
SH2D4A-202ENST00000518040 ABCB7O75027 752 aa14.61□□□□□ -0.07
SH2D4A-202ENST00000518040 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
SH2D4A-202ENST00000518040 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
SH2D4A-202ENST00000518040 CPDO75976 1380 aa14.61□□□□□ -0.07
SH2D4A-202ENST00000518040 CHD4Q14839 1912 aa14.6□□□□□ -0.07
SH2D4A-202ENST00000518040 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
SH2D4A-202ENST00000518040 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
SH2D4A-202ENST00000518040 ADGRB1O14514 1584 aa14.59□□□□□ -0.07
SH2D4A-202ENST00000518040 PTGER2P43116 358 aa14.58□□□□□ -0.07
SH2D4A-202ENST00000518040 SYT17Q9BSW7 474 aa14.58□□□□□ -0.07
SH2D4A-202ENST00000518040 ZBTB7AO95365 584 aa14.58□□□□□ -0.08
SH2D4A-202ENST00000518040 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
SH2D4A-202ENST00000518040 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.08
SH2D4A-202ENST00000518040 MYOM1P52179 1685 aa14.57□□□□□ -0.08
SH2D4A-202ENST00000518040 LMO7Q8WWI1 1683 aa14.57□□□□□ -0.08
SH2D4A-202ENST00000518040 FHDC1Q9C0D6 1143 aaPredicted RBP14.57□□□□□ -0.08
SH2D4A-202ENST00000518040 DDB1Q16531 1140 aa14.56□□□□□ -0.08
SH2D4A-202ENST00000518040 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms