RNA–Protein interactions for RNA: ENST00000516564.1

RNU6-358P-201, Transcript of RNA, U6 small nuclear 358, pseudogene, humanhuman

BASIC

Gene RNU6-358P, Length 75 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-358P-201ENST00000516564 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
RNU6-358P-201ENST00000516564 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
RNU6-358P-201ENST00000516564 TSC1Q92574 1164 aa8.33□□□□□ -1.08
RNU6-358P-201ENST00000516564 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
RNU6-358P-201ENST00000516564 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
RNU6-358P-201ENST00000516564 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
RNU6-358P-201ENST00000516564 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
RNU6-358P-201ENST00000516564 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
RNU6-358P-201ENST00000516564 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
RNU6-358P-201ENST00000516564 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
RNU6-358P-201ENST00000516564 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
RNU6-358P-201ENST00000516564 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
RNU6-358P-201ENST00000516564 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
RNU6-358P-201ENST00000516564 LILRB3O75022 631 aa8.3□□□□□ -1.08
RNU6-358P-201ENST00000516564 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
RNU6-358P-201ENST00000516564 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
RNU6-358P-201ENST00000516564 FOXJ1Q92949 421 aa8.3□□□□□ -1.08
RNU6-358P-201ENST00000516564 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
RNU6-358P-201ENST00000516564 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
RNU6-358P-201ENST00000516564 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
RNU6-358P-201ENST00000516564 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
RNU6-358P-201ENST00000516564 WFS1O76024 890 aa8.28□□□□□ -1.08
RNU6-358P-201ENST00000516564 BMP1P13497 986 aa8.28□□□□□ -1.08
RNU6-358P-201ENST00000516564 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.09
RNU6-358P-201ENST00000516564 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
RNU6-358P-201ENST00000516564 TRIM46Q7Z4K8 759 aa8.27□□□□□ -1.09
RNU6-358P-201ENST00000516564 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
RNU6-358P-201ENST00000516564 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
RNU6-358P-201ENST00000516564 NNTQ13423 1086 aa8.26□□□□□ -1.09
RNU6-358P-201ENST00000516564 MPNDQ8N594 471 aa8.26□□□□□ -1.09
RNU6-358P-201ENST00000516564 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
RNU6-358P-201ENST00000516564 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
RNU6-358P-201ENST00000516564 ARID5BQ14865 1188 aa8.25□□□□□ -1.09
RNU6-358P-201ENST00000516564 AGERQ15109 404 aa8.25□□□□□ -1.09
RNU6-358P-201ENST00000516564 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
RNU6-358P-201ENST00000516564 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
RNU6-358P-201ENST00000516564 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
RNU6-358P-201ENST00000516564 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
RNU6-358P-201ENST00000516564 ADH1CP00326 375 aa8.22□□□□□ -1.09
RNU6-358P-201ENST00000516564 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
RNU6-358P-201ENST00000516564 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
RNU6-358P-201ENST00000516564 CDK15Q96Q40 435 aa8.22□□□□□ -1.09
RNU6-358P-201ENST00000516564 TIMP2P16035 220 aa8.21□□□□□ -1.1
RNU6-358P-201ENST00000516564 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
RNU6-358P-201ENST00000516564 BCANQ96GW7 911 aa8.21□□□□□ -1.1
RNU6-358P-201ENST00000516564 ZFP42Q96MM3 310 aa8.21□□□□□ -1.1
RNU6-358P-201ENST00000516564 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
RNU6-358P-201ENST00000516564 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
RNU6-358P-201ENST00000516564 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
RNU6-358P-201ENST00000516564 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
RNU6-358P-201ENST00000516564 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
RNU6-358P-201ENST00000516564 GRM5P41594 1212 aa8.19□□□□□ -1.1
RNU6-358P-201ENST00000516564 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
RNU6-358P-201ENST00000516564 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
RNU6-358P-201ENST00000516564 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
RNU6-358P-201ENST00000516564 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
RNU6-358P-201ENST00000516564 NR3C2P08235 984 aa8.18□□□□□ -1.1
RNU6-358P-201ENST00000516564 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
RNU6-358P-201ENST00000516564 SH3RF1Q7Z6J0 888 aa8.18□□□□□ -1.1
RNU6-358P-201ENST00000516564 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
RNU6-358P-201ENST00000516564 MAGEB6P1A0A0J9YX57 407 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 NR5A1Q13285 461 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 ITPKCQ96DU7 683 aa8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
RNU6-358P-201ENST00000516564 SCARF1Q14162 830 aa8.16□□□□□ -1.1
RNU6-358P-201ENST00000516564 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
RNU6-358P-201ENST00000516564 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
RNU6-358P-201ENST00000516564 CARD14Q9BXL6 1004 aa8.16□□□□□ -1.1
RNU6-358P-201ENST00000516564 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
RNU6-358P-201ENST00000516564 WIPF1O43516 503 aa8.15□□□□□ -1.1
RNU6-358P-201ENST00000516564 VEGFBP49765 207 aa8.15□□□□□ -1.1
RNU6-358P-201ENST00000516564 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
RNU6-358P-201ENST00000516564 SOBPA7XYQ1 873 aa8.14□□□□□ -1.11
RNU6-358P-201ENST00000516564 VASH1Q7L8A9 365 aaPredicted RBP8.14□□□□□ -1.11
RNU6-358P-201ENST00000516564 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.14□□□□□ -1.11
RNU6-358P-201ENST00000516564 FSHRP23945 695 aa8.13□□□□□ -1.11
RNU6-358P-201ENST00000516564 NR6A1Q15406 480 aa8.13□□□□□ -1.11
RNU6-358P-201ENST00000516564 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
RNU6-358P-201ENST00000516564 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
RNU6-358P-201ENST00000516564 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
RNU6-358P-201ENST00000516564 PPP2R2DQ66LE6 453 aa8.12□□□□□ -1.11
RNU6-358P-201ENST00000516564 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
RNU6-358P-201ENST00000516564 GPKOWQ92917 476 aaPredicted RBP eCLIP8.12□□□□□ -1.11
RNU6-358P-201ENST00000516564 SLC24A1O60721 1099 aa8.11□□□□□ -1.11
RNU6-358P-201ENST00000516564 AP1G2O75843 785 aa8.11□□□□□ -1.11
RNU6-358P-201ENST00000516564 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
RNU6-358P-201ENST00000516564 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
RNU6-358P-201ENST00000516564 INSM1Q01101 510 aaPredicted RBP8.1□□□□□ -1.11
RNU6-358P-201ENST00000516564 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
RNU6-358P-201ENST00000516564 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
RNU6-358P-201ENST00000516564 BMP2P12643 396 aa8.09□□□□□ -1.11
RNU6-358P-201ENST00000516564 CCDC116Q8IYX3 515 aa8.09□□□□□ -1.11
RNU6-358P-201ENST00000516564 H3BM21 787 aa8.08□□□□□ -1.12
RNU6-358P-201ENST00000516564 GMPRP36959 345 aa8.08□□□□□ -1.12
RNU6-358P-201ENST00000516564 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
RNU6-358P-201ENST00000516564 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms