RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 TMEM151AQ8N4L1 468 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 KCTD17Q8N5Z5 321 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 BAP1Q92560 729 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 PCDHGC3Q9UN70 934 aa8.17□□□□□ -1.1
PDLIM5-218ENST00000513341 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-218ENST00000513341 NACADO15069 1562 aa8.14□□□□□ -1.11
PDLIM5-218ENST00000513341 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
PDLIM5-218ENST00000513341 RASSF7Q02833 373 aa8.14□□□□□ -1.11
PDLIM5-218ENST00000513341 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
PDLIM5-218ENST00000513341 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
PDLIM5-218ENST00000513341 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
PDLIM5-218ENST00000513341 GDF11O95390 407 aa8.13□□□□□ -1.11
PDLIM5-218ENST00000513341 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
PDLIM5-218ENST00000513341 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
PDLIM5-218ENST00000513341 MAN1A2O60476 641 aa8.12□□□□□ -1.11
PDLIM5-218ENST00000513341 NR5A1Q13285 461 aa8.12□□□□□ -1.11
PDLIM5-218ENST00000513341 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
PDLIM5-218ENST00000513341 ADAMTS8Q9UP79 889 aa8.1□□□□□ -1.11
PDLIM5-218ENST00000513341 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-218ENST00000513341 IGHA1P01876 353 aa8.09□□□□□ -1.11
PDLIM5-218ENST00000513341 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
PDLIM5-218ENST00000513341 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-218ENST00000513341 GJA5P36382 358 aa8.08□□□□□ -1.12
PDLIM5-218ENST00000513341 SPTLC1O15269 473 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 KRT76Q01546 638 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 SPIRE2Q8WWL2 714 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
PDLIM5-218ENST00000513341 UPP2O95045 317 aa8.06□□□□□ -1.12
PDLIM5-218ENST00000513341 MTMR2Q13614 643 aa8.06□□□□□ -1.12
PDLIM5-218ENST00000513341 LYPD8Q6UX82 237 aa8.06□□□□□ -1.12
PDLIM5-218ENST00000513341 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
PDLIM5-218ENST00000513341 DNMT3AQ9Y6K1 912 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-218ENST00000513341 GRM5P41594 1212 aa8.05□□□□□ -1.12
PDLIM5-218ENST00000513341 NR3C2P08235 984 aa8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 BMP2P12643 396 aa8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 FOXK2Q01167 660 aa8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 C6orf118Q5T5N4 469 aa8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 DNMT3LQ9UJW3 386 aa8.04□□□□□ -1.12
PDLIM5-218ENST00000513341 MOXD2PA6NHM9 499 aa8.03□□□□□ -1.12
PDLIM5-218ENST00000513341 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-218ENST00000513341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.03□□□□□ -1.12
PDLIM5-218ENST00000513341 TULP1O00294 542 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 SLURP2P0DP57 97 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 NDUFV2P19404 249 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 SSTR3P32745 418 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 FOXJ1Q92949 421 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 CNTNAP3BQ96NU0 1288 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 CNTNAP3Q9BZ76 1288 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
PDLIM5-218ENST00000513341 UNC13AQ9UPW8 1703 aa8.01□□□□□ -1.13
PDLIM5-218ENST00000513341 ZNF385CQ66K41 422 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-218ENST00000513341 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-218ENST00000513341 ARHGEF15O94989 841 aa8□□□□□ -1.13
PDLIM5-218ENST00000513341 CTHP32929 405 aa8□□□□□ -1.13
PDLIM5-218ENST00000513341 ARID5BQ14865 1188 aa8□□□□□ -1.13
PDLIM5-218ENST00000513341 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
PDLIM5-218ENST00000513341 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
PDLIM5-218ENST00000513341 COL25A1Q9BXS0 654 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-218ENST00000513341 BICRAQ9NZM4 1560 aa7.99□□□□□ -1.13
PDLIM5-218ENST00000513341 PTSQ03393 145 aa7.98□□□□□ -1.13
PDLIM5-218ENST00000513341 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
PDLIM5-218ENST00000513341 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-218ENST00000513341 TTLL8A6PVC2 850 aa7.97□□□□□ -1.13
PDLIM5-218ENST00000513341 XP32Q5T750 250 aa7.97□□□□□ -1.13
PDLIM5-218ENST00000513341 EMILIN1Q9Y6C2 1016 aa7.97□□□□□ -1.13
PDLIM5-218ENST00000513341 MYO15BQ96JP2 1530 aa7.97□□□□□ -1.13
PDLIM5-218ENST00000513341 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
PDLIM5-218ENST00000513341 SVOPQ8N4V2 548 aa7.96□□□□□ -1.14
PDLIM5-218ENST00000513341 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
PDLIM5-218ENST00000513341 CECR2Q9BXF3 1484 aa7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 PRPF38BQ5VTL8 546 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 GPAT2Q6NUI2 795 aa7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 RSBN1LQ6PCB5 846 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 SCARF2Q96GP6 870 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 MAP10Q9P2G4 905 aa7.95□□□□□ -1.14
PDLIM5-218ENST00000513341 SLC35F4A4IF30 521 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 IRS1P35568 1242 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 AMHR2Q16671 573 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 SHROOM4Q9ULL8 1493 aa7.94□□□□□ -1.14
PDLIM5-218ENST00000513341 SPINT1O43278 529 aa7.93□□□□□ -1.14
PDLIM5-218ENST00000513341 AGERQ15109 404 aa7.93□□□□□ -1.14
PDLIM5-218ENST00000513341 Q6ZVU0 165 aa7.93□□□□□ -1.14
PDLIM5-218ENST00000513341 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
PDLIM5-218ENST00000513341 FSHRP23945 695 aa7.92□□□□□ -1.14
PDLIM5-218ENST00000513341 PLCB2Q00722 1185 aa7.92□□□□□ -1.14
PDLIM5-218ENST00000513341 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
PDLIM5-218ENST00000513341 ITGA6P23229 1130 aa7.91□□□□□ -1.14
PDLIM5-218ENST00000513341 HRCP23327 699 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms