RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 CLASRPQ8N2M8 674 aaKnown RBP20.75■□□□□ 0.91
ARHGEF28-212ENST00000513042 MAP7D2Q96T17 732 aa20.75■□□□□ 0.91
ARHGEF28-212ENST00000513042 KINO60870 393 aaKnown RBP20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 SART3Q15020 963 aaKnown RBP20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 LETM1O95202 739 aaPredicted RBP20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 CCDC173Q0VFZ6 552 aa20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 KIF6Q6ZMV9 814 aa20.74■□□□□ 0.91
ARHGEF28-212ENST00000513042 MAGEC2Q9UBF1 373 aaPredicted RBP20.73■□□□□ 0.91
ARHGEF28-212ENST00000513042 PRKAR2BP31323 418 aa20.73■□□□□ 0.91
ARHGEF28-212ENST00000513042 SIL1Q9H173 461 aa20.73■□□□□ 0.91
ARHGEF28-212ENST00000513042 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
ARHGEF28-212ENST00000513042 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
ARHGEF28-212ENST00000513042 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
ARHGEF28-212ENST00000513042 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
ARHGEF28-212ENST00000513042 BCAR3O75815 825 aa20.71■□□□□ 0.91
ARHGEF28-212ENST00000513042 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
ARHGEF28-212ENST00000513042 TWISTNBQ3B726 338 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF28-212ENST00000513042 H0YHG0 523 aa20.7■□□□□ 0.91
ARHGEF28-212ENST00000513042 KRT18P05783 430 aaKnown RBP20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 CALRP27797 417 aaKnown RBP20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 GNAI3P08754 354 aa20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 STK38Q15208 465 aa20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 SMARCE1Q969G3 411 aa20.7■□□□□ 0.9
ARHGEF28-212ENST00000513042 ATP2B2Q01814 1243 aa20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 FILIP1LQ4L180 1135 aa20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 ZNF396Q96N95 335 aaPredicted RBP20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 BRD4O60885 1362 aaPredicted RBP20.69■□□□□ 0.9
ARHGEF28-212ENST00000513042 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
ARHGEF28-212ENST00000513042 ERCC4Q92889 916 aaPredicted RBP20.68■□□□□ 0.9
ARHGEF28-212ENST00000513042 GNAI2P04899 355 aa20.67■□□□□ 0.9
ARHGEF28-212ENST00000513042 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
ARHGEF28-212ENST00000513042 CUX1P39880 1505 aa20.67■□□□□ 0.9
ARHGEF28-212ENST00000513042 SERPINC1P01008 464 aa20.67■□□□□ 0.9
ARHGEF28-212ENST00000513042 AAMPQ13685 434 aa20.66■□□□□ 0.9
ARHGEF28-212ENST00000513042 GAS2L2Q8NHY3 880 aa20.66■□□□□ 0.9
ARHGEF28-212ENST00000513042 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
ARHGEF28-212ENST00000513042 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
ARHGEF28-212ENST00000513042 RABEP1Q15276 862 aa20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 CCDC158Q5M9N0 1113 aa20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 TXLNAP40222 546 aa20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 AXDND1Q5T1B0 1012 aaPredicted RBP20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 CCAR1Q8IX12 1150 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 DHX37Q8IY37 1157 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 HIP1O00291 1037 aa20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-212ENST00000513042 MBD3O95983 291 aa20.64■□□□□ 0.9
ARHGEF28-212ENST00000513042 DCTN1Q14203 1278 aa20.64■□□□□ 0.9
ARHGEF28-212ENST00000513042 ZHX3Q9H4I2 956 aa20.64■□□□□ 0.9
ARHGEF28-212ENST00000513042 SYCP1Q15431 976 aa20.64■□□□□ 0.89
ARHGEF28-212ENST00000513042 MYL6BP14649 208 aa20.64■□□□□ 0.89
ARHGEF28-212ENST00000513042 PLEKHO1Q53GL0 409 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF28-212ENST00000513042 MYO6Q9UM54 1294 aa20.64■□□□□ 0.89
ARHGEF28-212ENST00000513042 FAM177A1Q8N128 213 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF28-212ENST00000513042 CWC15Q9P013 229 aaKnown RBP20.63■□□□□ 0.89
ARHGEF28-212ENST00000513042 ERC1Q8IUD2 1116 aa20.63■□□□□ 0.89
ARHGEF28-212ENST00000513042 NUP133Q8WUM0 1156 aa20.63■□□□□ 0.89
ARHGEF28-212ENST00000513042 CYP46A1Q9Y6A2 500 aa20.63■□□□□ 0.89
ARHGEF28-212ENST00000513042 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 PLCD4Q9BRC7 762 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 TNMDQ9H2S6 317 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 PRAM1Q96QH2 718 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 TANGO6Q9C0B7 1094 aa20.62■□□□□ 0.89
ARHGEF28-212ENST00000513042 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 SPINK5Q9NQ38 1064 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 CCDC69A6NI79 296 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 LRRCC1Q9C099 1032 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 TSPYL1Q9H0U9 437 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 GPRASP1Q5JY77 1395 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 ME1P48163 572 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 CCP110O43303 1012 aa20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
ARHGEF28-212ENST00000513042 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
ARHGEF28-212ENST00000513042 PDCP20941 246 aa20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 TXNDC2Q86VQ3 553 aa20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 PPP1R1BQ9UD71 204 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 RDXP35241 583 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 MCM2P49736 904 aa20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 PAF1Q8N7H5 531 aa20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
ARHGEF28-212ENST00000513042 SULT6B1Q6IMI4 303 aa20.58■□□□□ 0.89
ARHGEF28-212ENST00000513042 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.88
ARHGEF28-212ENST00000513042 DEF6Q9H4E7 631 aa20.58■□□□□ 0.88
ARHGEF28-212ENST00000513042 CABP4P57796 275 aa20.58■□□□□ 0.88
ARHGEF28-212ENST00000513042 LEKR1Q6ZMV7 388 aa20.58■□□□□ 0.88
ARHGEF28-212ENST00000513042 SMARCA4P51532 1647 aa20.58■□□□□ 0.88
ARHGEF28-212ENST00000513042 K7ELQ4 463 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 NBPF1Q3BBV0 1214 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 WWC2Q6AWC2 1192 aa20.57■□□□□ 0.88
ARHGEF28-212ENST00000513042 PPFIBP1Q86W92 1011 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms