RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 DNMT3LQ9UJW3 386 aa9.88□□□□□ -0.83
NIPBL-206ENST00000509429 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
NIPBL-206ENST00000509429 PHF20L1A8MW92 1017 aa9.86□□□□□ -0.83
NIPBL-206ENST00000509429 JUNDP17535 347 aa9.86□□□□□ -0.83
NIPBL-206ENST00000509429 SOS2Q07890 1332 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-206ENST00000509429 BMP2P12643 396 aa9.85□□□□□ -0.83
NIPBL-206ENST00000509429 NUDT12Q9BQG2 462 aa9.85□□□□□ -0.83
NIPBL-206ENST00000509429 UPP2O95045 317 aa9.84□□□□□ -0.83
NIPBL-206ENST00000509429 MAP3K10Q02779 954 aa9.84□□□□□ -0.83
NIPBL-206ENST00000509429 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
NIPBL-206ENST00000509429 LYPD4Q6UWN0 246 aa9.83□□□□□ -0.84
NIPBL-206ENST00000509429 ZIC2O95409 532 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-206ENST00000509429 BAG6P46379 1132 aa9.82□□□□□ -0.84
NIPBL-206ENST00000509429 PTSQ03393 145 aa9.82□□□□□ -0.84
NIPBL-206ENST00000509429 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
NIPBL-206ENST00000509429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.81□□□□□ -0.84
NIPBL-206ENST00000509429 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
NIPBL-206ENST00000509429 ENAMQ9NRM1 1142 aa9.81□□□□□ -0.84
NIPBL-206ENST00000509429 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
NIPBL-206ENST00000509429 CNTNAP5Q8WYK1 1306 aa9.8□□□□□ -0.84
NIPBL-206ENST00000509429 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
NIPBL-206ENST00000509429 HIC1Q14526 733 aa9.79□□□□□ -0.84
NIPBL-206ENST00000509429 BEND7Q8N7W2 519 aaPredicted RBP9.79□□□□□ -0.84
NIPBL-206ENST00000509429 ITPKCQ96DU7 683 aa9.78□□□□□ -0.84
NIPBL-206ENST00000509429 CCDC155Q8N6L0 562 aa9.77□□□□□ -0.85
NIPBL-206ENST00000509429 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
NIPBL-206ENST00000509429 FURINP09958 794 aa9.76□□□□□ -0.85
NIPBL-206ENST00000509429 VWA5B2Q8N398 1253 aa9.76□□□□□ -0.85
NIPBL-206ENST00000509429 SV2AQ7L0J3 742 aa9.75□□□□□ -0.85
NIPBL-206ENST00000509429 BAP1Q92560 729 aa9.75□□□□□ -0.85
NIPBL-206ENST00000509429 KDM4AO75164 1064 aa9.74□□□□□ -0.85
NIPBL-206ENST00000509429 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
NIPBL-206ENST00000509429 MEIOBQ8N635 442 aa9.74□□□□□ -0.85
NIPBL-206ENST00000509429 SRSF11Q05519 484 aaKnown RBP9.73□□□□□ -0.85
NIPBL-206ENST00000509429 PODNQ7Z5L7 613 aa9.73□□□□□ -0.85
NIPBL-206ENST00000509429 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
NIPBL-206ENST00000509429 UNC93B1Q9H1C4 597 aa9.73□□□□□ -0.85
NIPBL-206ENST00000509429 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
NIPBL-206ENST00000509429 HLA-CQ95604 372 aa9.72□□□□□ -0.85
NIPBL-206ENST00000509429 CDC14CA4D256 554 aa9.71□□□□□ -0.86
NIPBL-206ENST00000509429 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
NIPBL-206ENST00000509429 ITGA6P23229 1130 aa9.71□□□□□ -0.86
NIPBL-206ENST00000509429 CDK15Q96Q40 435 aa9.71□□□□□ -0.86
NIPBL-206ENST00000509429 TTLL8A6PVC2 850 aa9.7□□□□□ -0.86
NIPBL-206ENST00000509429 USP46P62068 366 aa9.7□□□□□ -0.86
NIPBL-206ENST00000509429 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
NIPBL-206ENST00000509429 SLC35F4A4IF30 521 aa9.69□□□□□ -0.86
NIPBL-206ENST00000509429 SPTLC1O15269 473 aa9.69□□□□□ -0.86
NIPBL-206ENST00000509429 CD46P15529 392 aa9.69□□□□□ -0.86
NIPBL-206ENST00000509429 NR5A1Q13285 461 aa9.69□□□□□ -0.86
NIPBL-206ENST00000509429 PHOX2BQ99453 314 aa9.68□□□□□ -0.86
NIPBL-206ENST00000509429 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
NIPBL-206ENST00000509429 NR3C2P08235 984 aa9.67□□□□□ -0.86
NIPBL-206ENST00000509429 RETREG3Q86VR2 466 aa9.67□□□□□ -0.86
NIPBL-206ENST00000509429 SYMPKQ92797 1274 aaKnown RBP9.67□□□□□ -0.86
NIPBL-206ENST00000509429 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
NIPBL-206ENST00000509429 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
NIPBL-206ENST00000509429 MS4A1P11836 297 aa9.65□□□□□ -0.86
NIPBL-206ENST00000509429 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
NIPBL-206ENST00000509429 SH3RF1Q7Z6J0 888 aa9.65□□□□□ -0.86
NIPBL-206ENST00000509429 KRTAP19-1Q8IUB9 90 aa9.65□□□□□ -0.86
NIPBL-206ENST00000509429 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
NIPBL-206ENST00000509429 GNPATO15228 680 aa9.64□□□□□ -0.87
NIPBL-206ENST00000509429 HOXA2O43364 376 aa9.64□□□□□ -0.87
NIPBL-206ENST00000509429 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
NIPBL-206ENST00000509429 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
NIPBL-206ENST00000509429 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
NIPBL-206ENST00000509429 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
NIPBL-206ENST00000509429 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
NIPBL-206ENST00000509429 PTPRNQ16849 979 aa9.61□□□□□ -0.87
NIPBL-206ENST00000509429 GRM5P41594 1212 aa9.6□□□□□ -0.87
NIPBL-206ENST00000509429 BCRP11274 1271 aa9.57□□□□□ -0.88
NIPBL-206ENST00000509429 GAS6Q14393 721 aa9.57□□□□□ -0.88
NIPBL-206ENST00000509429 KRTAP4-7Q9BYR0 210 aa9.57□□□□□ -0.88
NIPBL-206ENST00000509429 ITGB7P26010 798 aa9.56□□□□□ -0.88
NIPBL-206ENST00000509429 ZMYM1Q5SVZ6 1142 aa9.56□□□□□ -0.88
NIPBL-206ENST00000509429 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
NIPBL-206ENST00000509429 GOLGA2P5Q9HBQ8 144 aa9.56□□□□□ -0.88
NIPBL-206ENST00000509429 SPINT1O43278 529 aa9.52□□□□□ -0.89
NIPBL-206ENST00000509429 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
NIPBL-206ENST00000509429 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
NIPBL-206ENST00000509429 KCNV2Q8TDN2 545 aa9.5□□□□□ -0.89
NIPBL-206ENST00000509429 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
NIPBL-206ENST00000509429 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
NIPBL-206ENST00000509429 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
NIPBL-206ENST00000509429 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
NIPBL-206ENST00000509429 IGF1RP08069 1367 aa9.48□□□□□ -0.89
NIPBL-206ENST00000509429 GPR37O15354 613 aa9.47□□□□□ -0.89
NIPBL-206ENST00000509429 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
NIPBL-206ENST00000509429 ACDQ96AP0 544 aa9.46□□□□□ -0.9
NIPBL-206ENST00000509429 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
NIPBL-206ENST00000509429 RBM26Q5T8P6 1007 aaKnown RBP9.45□□□□□ -0.9
NIPBL-206ENST00000509429 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
NIPBL-206ENST00000509429 FSHRP23945 695 aa9.44□□□□□ -0.9
NIPBL-206ENST00000509429 COL8A1P27658 744 aa9.44□□□□□ -0.9
NIPBL-206ENST00000509429 SNRPNP63162 240 aaKnown RBP9.44□□□□□ -0.9
NIPBL-206ENST00000509429 Q6ZVU0 165 aa9.43□□□□□ -0.9
NIPBL-206ENST00000509429 PCDHGC3Q9UN70 934 aa9.43□□□□□ -0.9
NIPBL-206ENST00000509429 SEMA3EO15041 775 aa9.42□□□□□ -0.9
NIPBL-206ENST00000509429 FDX1P10109 184 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms